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AtCHX03 / At5g22900 ›› ARAMEMNON · TAIR · PLANTS T · MIPS · TIGR
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Exon/Intron Map (from TIGR):
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Sequences ›› partial cDNA [ Sze Lab ] · PAC MRN17 [ ATG-STOP: 51708 - 54352 ]
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Genomic DNA (3645 bp):
Coding sequence -- confirmed by cDNA from Sze Lab -- in blue.
Start: 500 bp before ATG; End: 500 bp after STOP
1 cctccaatct gatcaccggg acgtgagcaa gaacacggga tcggagatga ttactcgtca
61 tcataatctg atgatccatc ggaatcaccg gagaaataga ggcggcacgt ggtatcgcca
121 gaagttggat tgtaatttct ttcttcatga cctttggcaa tttgtctgtt gtagtttgct
181 caattacccg taaattagca gaattaagtt gtaacctgta aaaactaaca gtaatcagac
241 aatcctttaa aatatatata tttatgtcgc cggccaaaac ctgtttcttg ttggtaacgt
301 ttgcccattc attatttact attattaggg ttttaaaact cagatgatca cttgttcttt
361 agattctgtt acctaaacag taaaagaaga attaattcat ataaaagatc caaatccttg
421 taatccttct ccgataacac attgctcctg gaatcttttt ttttttttaa tttgtttcat
481 ttgagggttc atcatcatca ATGGAGGTGT TTGGAGATAA TAAGATGTTT TACATGAGAG
541 ACACATGGAG AGAAGGAACC ATGATTTGTG ACGTCTTACC TATCAACCCT AGCTCCAATG
601 GTGTTTGGCC GCAACAAAAA TTCTCAGATC CTAACATCAA TGTTCATTTC TGGAATTACG
661 CGTTTCCACA CTTGCAAATG ATATTTCTCA TCATCTCTTT CTTATGGCAA TTCTTACATT
721 TCTTCCTTCG ACGTCTTGGC ATGATACGTT TCACTTCTCA TATGCTTgta agtaatcgaa
781 aatctcgatt tcgttttctt gttatctgga tttgaaattt gaggtttgtg ttgatctttg
841 tttgtagACT GGTGTTCTTT TAAGCAAGTC TTTTCTAAAG GAGAATTCAG CAGCGAGAAG
901 ATTCTTTTCT ACAGAGGATT ACAAAGAGAT TGTGTTTAGT CTCACTGCTG CTTGTTCTTA
961 CATGATGTTC TGGTTCTTGA TGGGAGTTAA AATGGACACG GGTTTGATCC GAACCACAGG
1021 AAGAAAAGCT ATCACCATTG GGCTCTCCTC TGTTTTACTT TCGACGTTAG TTTGTTCCGT
1081 TATCTTCTTC GGAAACTTAA GGGACGTTGG AACGAAAAAC TCAGACCATA CTCTCAATTC
1141 ATTAGAGTAT GTTGTGATTT ACTCAATCCA ATGTCTTTCT TCTTTCCCCG TTGTTGGAAA
1201 CCTTCTCTTT GAGCTCAGGC TACAAAACTC AGAGCTTGGT CGTCTAGCGA TATCTTCTGC
1261 TGTGATAAGT GATTTCAGCA CCTCAATTCT CGCTTCCGTT CTCATATTTA TGAAGGAGCT
1321 CAAGGACGAA CAAACACGGC TCGGGAGTGT GTTTATAGGT GATGTTATTG CAGGGAATCG
1381 TCCTTTGATG CGAGCAGGGA TAGTGGTTCT CTTTGTATGT ATTGCCATCT ATGTTTTCAG
1441 ACCGTTAATG TTCTACATTA TTAAACAAAC ACCTTCCGGT CGTCCCGTCA AGGCAATCTA
1501 CTTAAGTACA ATAATTGTTA TGGTTTCTGG TTCAGCCATT CTTGCCAATT GGTGCAAGCA
1561 ATCTATTTTC ATGGGACCTT TCATCTTAGG TCTTGCTGTT CCTCATGGTC CTCCTTTAGG
1621 TTCTGCGATC ATTCAGAAGT ATGAGTCGGC TATATTCGGA ACTTTTCTTC CGTTTTTCAT
1681 TGCTTCATCT TCCACGGAGA TCGATATTTC GGCTTTATTT GGTTGGGAAG GTCTCAATGG
1741 TATTATACTC ATCATGGTAA CATCTTTTGT CGTCAAGTTC ATCTTTACTA CTGTTCCTGC
1801 TTTGTTCTAT GGTATGCCGA TGGAAGATTG CTTCGCTCTA TCTCTTATCA TGTCGTTTAA
1861 AGGCATCTTC GAGCTCGGTG CCTACGCCTT GGCCTACCAA AGAGGGgtat gtaattatgt
1921 atacacacat aatgaagttc ataatcataa ttaatcattt caatacaaag tttatcttat
1981 gtttatgctt tgaacattgc agTCTGTCCG TCCCGAGACC TTCACTGTGG CGTGTCTTTA
2041 CATAACGTTG AACTCCGCAA TCATTCCTCC GATCTTGCGG TACTTATACG ATCCTTCGAG
2101 GATGTACGCG GGGTACGAGA AGCGGAATAT GCAGCATTTG AAACCAAACT CTGAGCTAAG
2161 GATTCTGTCT TGCATTTACA GAACTGATGA TATAAGTCCA ATGATTAATC TTCTTGAAGC
2221 TATTTGTCCG TCCCGGGAAT CTCCTGTAGC TACCTACGTT CTCCACTTGA TGGAGCTTGT
2281 AGGACAAGCA AATCCGATCT TCATTTCACA TAAATTGCAA ACTCGCAGAA CAGAGGAGAC
2341 GTCTTATTCA AACAATGTAC TTGTCTCCTT TGAAAAGTTT CGTAAAGATT TCTATGGTTC
2401 GGTCTTCGTA AGCACCTACA CGGCTTTATC TATGCCCGAT ACGATGCACG GAGATATATG
2461 TATGCTTGCT CTCAACAACA CTACTTCTCT CATACTCCTT CCTTTTCACC AGACTTGGTC
2521 TGCTGACGGA TCAGCTCTTA TCTCTAACAA TAACATGATC CGGAACCTTA ACAAGAGCGT
2581 TCTCGACGTG GCACCTTGTT CTGTCGGAGT CTTTGTATAC CGAAGCAGTT CCGGACGGAA
2641 AAACATCAGT TCCGGACGGA AAACCATCAA TGGCACAGTT CCAAACTTAT CATCTTACAA
2701 TATTTGTATG ATCTTCCTAG GCGGTAAAGA CGATAGAGAA GCAGTGACAC TTGCTACACG
2761 AATGGCCCGT GACCCAAGGA TCAATATAAC CATTGTTCGA CTGATCACTA CCGATGAGAA
2821 AGCACGAGAG AACACGGTGT GGGATAAAAT GCTTGACGAT GAACTTCTTA GAGACGTGAA
2881 AAGCAATACA TTAGTAGACA TTTTCTACTC GGAGAAAGCG ATTGAAGACG CGGCTGAAAC
2941 ATCGAGTTTG CTAAGATCGA TGGTAAGCGA TTTCGATATG TTCATAGTGG GAAGAGGGAA
3001 CGGAAGGACG AGTGTGTTCA CAGAAGGGCT TGAGGAATGG AGTGAGTTTA AGGAGCTTGG
3061 TATTATTGGA GATTTATTGA CTTCACAGGA TTTTAATTGC CAAGCTTCTG TTTTGGTTAT
3121 ACAACAACAA CAGCTAATGA TTTAGgttct tatatacgta cataatcatt ttgcaatttt
3181 accattcttt tcattataga cttagaaatt taattgtaag aagaatattt tttttgtaaa
3241 ttttatttag accattcaaa tgtaactttt tggaaaatcc acttagccga tcagttcatc
3301 acaaatataa tcgcataagg ttttgcgatc aacaactata ttaatcttta tatttataga
3361 aaatcatgtt tatattaaca ctaaaacaac atagagggaa atagagaaac tggtcaagat
3421 cgaacatatt tatttaggtt aaaatagttt gaaatttcat gttgaacaat gtaagaaatc
3481 gaagtaaaat acaagacatt ttcacttatt tttcgatcag tttcactgaa acctttgttg
3541 tgcttgagct cggatgaaca atggagatat ctcacgtttg aatttttctc ttacataatc
3601 tgtgttttag aaatcattgg atattcatag gagtggttat agaac
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Coding Sequence (2469 bp):
1 ATGGAGGTGT TTGGAGATAA TAAGATGTTT TACATGAGAG ACACATGGAG AGAAGGAACC
61 ATGATTTGTG ACGTCTTACC TATCAACCCT AGCTCCAATG GTGTTTGGCC GCAACAAAAA
121 TTCTCAGATC CTAACATCAA TGTTCATTTC TGGAATTACG CGTTTCCACA CTTGCAAATG
181 ATATTTCTCA TCATCTCTTT CTTATGGCAA TTCTTACATT TCTTCCTTCG ACGTCTTGGC
241 ATGATACGTT TCACTTCTCA TATGCTTACT GGTGTTCTTT TAAGCAAGTC TTTTCTAAAG
301 GAGAATTCAG CAGCGAGAAG ATTCTTTTCT ACAGAGGATT ACAAAGAGAT TGTGTTTAGT
361 CTCACTGCTG CTTGTTCTTA CATGATGTTC TGGTTCTTGA TGGGAGTTAA AATGGACACG
421 GGTTTGATCC GAACCACAGG AAGAAAAGCT ATCACCATTG GGCTCTCCTC TGTTTTACTT
481 TCGACGTTAG TTTGTTCCGT TATCTTCTTC GGAAACTTAA GGGACGTTGG AACGAAAAAC
541 TCAGACCATA CTCTCAATTC ATTAGAGTAT GTTGTGATTT ACTCAATCCA ATGTCTTTCT
601 TCTTTCCCCG TTGTTGGAAA CCTTCTCTTT GAGCTCAGGC TACAAAACTC AGAGCTTGGT
661 CGTCTAGCGA TATCTTCTGC TGTGATAAGT GATTTCAGCA CCTCAATTCT CGCTTCCGTT
721 CTCATATTTA TGAAGGAGCT CAAGGACGAA CAAACACGGC TCGGGAGTGT GTTTATAGGT
781 GATGTTATTG CAGGGAATCG TCCTTTGATG CGAGCAGGGA TAGTGGTTCT CTTTGTATGT
841 ATTGCCATCT ATGTTTTCAG ACCGTTAATG TTCTACATTA TTAAACAAAC ACCTTCCGGT
901 CGTCCCGTCA AGGCAATCTA CTTAAGTACA ATAATTGTTA TGGTTTCTGG TTCAGCCATT
961 CTTGCCAATT GGTGCAAGCA ATCTATTTTC ATGGGACCTT TCATCTTAGG TCTTGCTGTT
1021 CCTCATGGTC CTCCTTTAGG TTCTGCGATC ATTCAGAAGT ATGAGTCGGC TATATTCGGA
1081 ACTTTTCTTC CGTTTTTCAT TGCTTCATCT TCCACGGAGA TCGATATTTC GGCTTTATTT
1141 GGTTGGGAAG GTCTCAATGG TATTATACTC ATCATGGTAA CATCTTTTGT CGTCAAGTTC
1201 ATCTTTACTA CTGTTCCTGC TTTGTTCTAT GGTATGCCGA TGGAAGATTG CTTCGCTCTA
1261 TCTCTTATCA TGTCGTTTAA AGGCATCTTC GAGCTCGGTG CCTACGCCTT GGCCTACCAA
1321 AGAGGGTCTG TCCGTCCCGA GACCTTCACT GTGGCGTGTC TTTACATAAC GTTGAACTCC
1381 GCAATCATTC CTCCGATCTT GCGGTACTTA TACGATCCTT CGAGGATGTA CGCGGGGTAC
1441 GAGAAGCGGA ATATGCAGCA TTTGAAACCA AACTCTGAGC TAAGGATTCT GTCTTGCATT
1501 TACAGAACTG ATGATATAAG TCCAATGATT AATCTTCTTG AAGCTATTTG TCCGTCCCGG
1561 GAATCTCCTG TAGCTACCTA CGTTCTCCAC TTGATGGAGC TTGTAGGACA AGCAAATCCG
1621 ATCTTCATTT CACATAAATT GCAAACTCGC AGAACAGAGG AGACGTCTTA TTCAAACAAT
1681 GTACTTGTCT CCTTTGAAAA GTTTCGTAAA GATTTCTATG GTTCGGTCTT CGTAAGCACC
1741 TACACGGCTT TATCTATGCC CGATACGATG CACGGAGATA TATGTATGCT TGCTCTCAAC
1801 AACACTACTT CTCTCATACT CCTTCCTTTT CACCAGACTT GGTCTGCTGA CGGATCAGCT
1861 CTTATCTCTA ACAATAACAT GATCCGGAAC CTTAACAAGA GCGTTCTCGA CGTGGCACCT
1921 TGTTCTGTCG GAGTCTTTGT ATACCGAAGC AGTTCCGGAC GGAAAAACAT CAGTTCCGGA
1981 CGGAAAACCA TCAATGGCAC AGTTCCAAAC TTATCATCTT ACAATATTTG TATGATCTTC
2041 CTAGGCGGTA AAGACGATAG AGAAGCAGTG ACACTTGCTA CACGAATGGC CCGTGACCCA
2101 AGGATCAATA TAACCATTGT TCGACTGATC ACTACCGATG AGAAAGCACG AGAGAACACG
2161 GTGTGGGATA AAATGCTTGA CGATGAACTT CTTAGAGACG TGAAAAGCAA TACATTAGTA
2221 GACATTTTCT ACTCGGAGAA AGCGATTGAA GACGCGGCTG AAACATCGAG TTTGCTAAGA
2281 TCGATGGTAA GCGATTTCGA TATGTTCATA GTGGGAAGAG GGAACGGAAG GACGAGTGTG
2341 TTCACAGAAG GGCTTGAGGA ATGGAGTGAG TTTAAGGAGC TTGGTATTAT TGGAGATTTA
2401 TTGACTTCAC AGGATTTTAA TTGCCAAGCT TCTGTTTTGG TTATACAACA ACAACAGCTA
2461 ATGATTTAG
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Protein Sequence (822 aa):
1 MEVFGDNKMF YMRDTWREGT MICDVLPINP SSNGVWPQQK FSDPNINVHF WNYAFPHLQM
61 IFLIISFLWQ FLHFFLRRLG MIRFTSHMLT GVLLSKSFLK ENSAARRFFS TEDYKEIVFS
121 LTAACSYMMF WFLMGVKMDT GLIRTTGRKA ITIGLSSVLL STLVCSVIFF GNLRDVGTKN
181 SDHTLNSLEY VVIYSIQCLS SFPVVGNLLF ELRLQNSELG RLAISSAVIS DFSTSILASV
241 LIFMKELKDE QTRLGSVFIG DVIAGNRPLM RAGIVVLFVC IAIYVFRPLM FYIIKQTPSG
301 RPVKAIYLST IIVMVSGSAI LANWCKQSIF MGPFILGLAV PHGPPLGSAI IQKYESAIFG
361 TFLPFFIASS STEIDISALF GWEGLNGIIL IMVTSFVVKF IFTTVPALFY GMPMEDCFAL
421 SLIMSFKGIF ELGAYALAYQ RGSVRPETFT VACLYITLNS AIIPPILRYL YDPSRMYAGY
481 EKRNMQHLKP NSELRILSCI YRTDDISPMI NLLEAICPSR ESPVATYVLH LMELVGQANP
541 IFISHKLQTR RTEETSYSNN VLVSFEKFRK DFYGSVFVST YTALSMPDTM HGDICMLALN
601 NTTSLILLPF HQTWSADGSA LISNNNMIRN LNKSVLDVAP CSVGVFVYRS SSGRKNISSG
661 RKTINGTVPN LSSYNICMIF LGGKDDREAV TLATRMARDP RINITIVRLI TTDEKARENT
721 VWDKMLDDEL LRDVKSNTLV DIFYSEKAIE DAAETSSLLR SMVSDFDMFI VGRGNGRTSV
781 FTEGLEEWSE FKELGIIGDL LTSQDFNCQA SVLVIQQQQL MI
›› Fasta: All CHX Protein Sequences
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Back to the Top · Last Revision: October 16, 2006 |
