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AtCHX07 / At2g28170 ›› ARAMEMNON · TAIR · PLANTS T · MIPS · TIGR
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Exon/Intron Map (revised by K. Bock):
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Sequences ›› cDNA [ None Available ] · BAC F24D13 [ ATG-STOP: 15269 - 18854 ]
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Genomic DNA (4586 bp):
Revised predicted coding sequence in blue.
Start: 500 bp before ATG; End: 500 bp after STOP
1 tttttttact aagaaaaaca tcaatctcaa acatctaaac cctatgacgg atccgaaaga
61 ctgatcttgg acacaagaaa tgaaattaca cacattccta tatattatat attgatcatc
121 aattagaaat gattctctat ttcttaatct atcttaacct aaatctgaat ctcgatcatt
181 aaacaattac cgtacaatta taaccaaacc gttatggttt actgatcacc aactgaaatt
241 acatcgcctt gtatagattt gagtgtataa aaggagtttc actaatttta ggataaacat
301 cgaaatctat ctgtcctaac ccctatttaa tcagttcacc aagaacacaa gaaccgaaac
361 acctgcaaag ttgtttttat atagtcatgt attaaaggtt aaatatagga tatctttgtt
421 gtaccaaaac tcttaaaaca ccttttaaaa tctaatattt tttaactctc acaccataca
481 acattgttac tatacatcct ATGGATCCCT TCAATGCGAG TTGGTGGACC AATATGGCCT
541 GGCACGGCTA TTCGCTCAGC GAGGACGGGA CTAAGTTCTG TGAGATGCTT CCGACTAAGA
601 TCAACTCTTT CGGTTTGTCG GAGAAAATTC TTCACAAATC AGTAGGGTTG TATTTTTGGG
661 AATATCCTCT ACCCAATCTA GAGCTCATTA TTCTCTCGGT ATTTTTCTTC TGGCAGTTCT
721 TTGAGATCTT GTTCAAAATG TCCAATATTC CCATTCCTAA AATGCCTTCC ATGATGCTTg
781 taagtagagt gattgtctct taactttcaa atgattaagg atatttccaa agaaaattca
841 aaagttattt tccgattttg tgtttaatta tttgtgataa aagaatcatt ttataatcct
901 cattcaaaat ttgatttttt acgatatata tatatatata tatatatata tattaataat
961 tacctcattt tgcgcatttt tgttcattca aaatttcaca tttttaaatt acaagcattt
1021 tatatttgga taattgtaaa agtttctcat ttagtttgtg cttttttttt ttttttttgg
1081 caaaaagaat atcatattac accatgcaaa cgcaaaacaa acaatgaatg tgattttgat
1141 tacgtgaaaa caattgtatt gctgaagGGG TGTGTGGTCA TCAACCTGTT TTCTTACACC
1201 AGGCCAGGCT CTTTGCTTCA TCGGATGTTT TTCCCGGACG ACGGGAGGCC AAAGGTTGCC
1261 GAGACCGGGG GTGCATTCGG GTTTGTAATG TACTGGTTCC TTAAAGGCGT GTCTATAGAC
1321 GTTGGGATGC TTAGAAAAAC CGAACCGAGG GCTGCTTTAA TTGGGTTCAA TACATTGGTC
1381 ATCCCATATA TATCCGGTTA CATTCTAATG AGGACTAGGA AACATTTTGG GAAGTTGGCA
1441 ATGACGGAAC TTCAATACCA GGAAATCATA TTATTGCAAA GTTTATCATC ATTTGCTGGT
1501 GTGAATGGAC TCTTGACAGA TCTCAAGATC AACCATTCCG AGTTTGGACG AATGGTTCAG
1561 TCTTGTGCCG CGGTCACTGA CTTAGTAATC TTTATAATGG TCTCCGGGAC CGTTCTTTTA
1621 AAAGGACAAA AAGGTTTACC ACATGGTATT GTTATCGTTT TGGTTATAGG CTTCTTGGTC
1681 TACATCGTAT GGCCGGTCAT GTTATGGATT ATCAAGCAGA CACCAGAAGG CAGGCTGGTT
1741 AAAGATGTCT ACATTTACTT GGTTATGGCT ACCGCATATT TTGTTTACAT GTTTTGGCTT
1801 AATTTCTTTC AATTCTCAAC ATATGGCTGG TTTATTATCG GTTTGGCTAC CCCGGCTGGG
1861 CCTCCACTCG GATCGGCTCT CATTCAAAGA TTTGAATGTT TTAACGTTGG TGTTTTGTTG
1921 CCGCTCTTTG GATCTCTTAG CATGGAACAA CTAGATATAT CGTGGTTGAT GCGAGAGATA
1981 CTGAACCTTA AACACATGGA GGGCTTCGCT TATGAAGCTA TTTCGGTTAT CTTGATCGTC
2041 ACCGTGGTTA AATTTGTCGT CACAGCAATA ACTGCTTTTG CTGTGAGAAT TCCATACCGA
2101 GACTCCATTG TTTTAGCCAT GGTTTTGTCA AATAGAAGTA TCTTTGAGCT CGGCTACCTC
2161 GGCTACATTG TCGAACTTAA Agtaagaact caattatgtt tcaatccttc catttttttt
2221 ttacatgcta caaatttagg ggtgttcaac acgattttag ctcggtctta gtttcagatt
2281 ttccgttaat gaaccataat atgcaaagta cagcatgatc tgttatagat gatttggtat
2341 gatttaggtt cgcattcgag ttttagtcac atatttcttt aattttcaaa gaaatttcgg
2401 ttttgatcgt ttttctctcc ttcctttttt tgtttgtttt gcattcggat tcattttgca
2461 gatatacatg caataggtaa atgaatctat taaaccatat agattcatga ttcatttttc
2521 aaaattatga tttcctgttt ttggaccaat cacttagtat aaaaccaata ccttaagcat
2581 taacacttat ttgttaaatt taacatgtta aattgttaac tcttaaattt caaacgtagt
2641 aaaataattt tggatctttt tttttttaac atgtaatggc aaacacataa aaataaaata
2701 ttgaggttca aaacaataac aaacttattg atccatctca ctacatatta acaacaatcc
2761 attcttattt ttaaaacagA TGTTCGACAA CAAGAGCTTC ACGATCGCGG CTCTATCAGT
2821 ACTTGTCAGC TCGCTATTGA CACCGATCGC GATAGAATTC ATGTACGAAC CACAACATAT
2881 CTTTAGTAGT TACCGAGATA GGAACATGTT AACCTTGAAA CATGACTCTA AGCTGAAGAC
2941 CCTTGTGTGT ATTCACAAGC CTGACCACAT AACATCCATG GTCAACTTTG TGGAACTTTT
3001 TAACCCAACA CAAGAATCAA AATTAGAATG CAATGTTCTT CACCTTGTGG AGCTCATAGG
3061 TCAGGCCATT CCTACCTTCA TTTCCCACAA GATGCAAAAG CCGAAGGTTG GAACACGCTC
3121 TTGCTCCCGC AATGTCATAA CTGCATTCTT AAGCCTTCGT AGACATTTAA CCAAAGAGGC
3181 AATTTCCATT GACATCTTTA CATCTGCTAG CTTGGTAGAG CACATGCACG AGGACCTCTG
3241 TTGGCTTGCC CTTGACAAGA ATGTAGCTCT CGTTGTACTT CCTTTTCACC GTTCTTGGTC
3301 TGTTGACCGC TCAACCATTG TCTCTGACGA CAAGGCCATG CAGAATCTCA ACCACAAAGT
3361 CTTGAAAAGA GCGTCTTGCT CTGTTGGAAT CTTCGTCTAC CGGAAACCTT TATGGGAATC
3421 TCAAATGCAC GGCTCATGTT ACAAGgtact tgtttttttt cttttgtaat taagagatct
3481 catggttaat ttttggggtc gtctggcttc caactcaaaa caaaccgacg attagtatat
3541 ttggcccatg ttttttctat actagtgttg gtacctacac atttcttccg atgtgtgatc
3601 ttaacaagtt ctaaactggt ctcgtggttt gtatttcagG TGTGTGCAAT AGTTGTGGGA
3661 GGGAAAGACG ATAAAGAAGC CTTAGCATTC ACCAACCGTA TGAGGAGAAA CAAGCAGACA
3721 AGCGTAACCA TCTTACACCT CATACCTCAA CTTACTACCG AGGAAAGCGA AGACTCGGTG
3781 CAGAAGTTGG ATTACGATGA CATAAAAGAG ATAATGAAGA CTGAGGATTC AAATGAAAAT
3841 GATTCATGGA TATGTATAGA AAAAAGCGTC AAAGAAGGGG CTGAGACTTC AGTGATACTT
3901 AGATCAATAG CGTATGATTA TGATTTGTTT ATAGTTGGAA GAAGTAGCGG AATGAATAGC
3961 GCAGTTACAA AAGGATTAAA TGAATGGACA GAGTTCGAGG AACTTGGAGC CCTCGGAGAT
4021 GTTATAGCGT CAAAGGAGTT TCCTTCAAGG GCATCTGTCT TGGTCTTGCA ACAGCAACAA
4081 TATTAGaatc tttttgtttt accatgttat gaatatccaa agcacaaatt aggttcctag
4141 agttgagtcg gcgatccata taggtcgtct gtactgcttt ctcggggtta aaattcttta
4201 ttcttttacc aatcaaacag agaacaatac atagaatcaa gatgtgaatg gtcttgcaac
4261 aacaaagcaa taatacagcc aatgaaccaa aacgtgatat atcaaagcaa aagaaactta
4321 agacttgaga ctataaacaa aacataaata ttacttcatt taaccataca atttgtcgct
4381 aaattactat ataacatggt gtttattcaa tagagaatca acaatctcgg ttacatcatc
4441 actagaatag aaattagagc cctggaagtt atgaaacatg taagaaaggt acacaatcaa
4501 tatagtgcag aaccggattt gactcacgtt agagcaagcg ttatagaatc aagtaaatga
4561 cttgatgaat tcaaaacctt gattta
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Revised Predicted Coding Sequence (2406 bp):
1 ATGGATCCCT TCAATGCGAG TTGGTGGACC AATATGGCCT GGCACGGCTA TTCGCTCAGC
61 GAGGACGGGA CTAAGTTCTG TGAGATGCTT CCGACTAAGA TCAACTCTTT CGGTTTGTCG
121 GAGAAAATTC TTCACAAATC AGTAGGGTTG TATTTTTGGG AATATCCTCT ACCCAATCTA
181 GAGCTCATTA TTCTCTCGGT ATTTTTCTTC TGGCAGTTCT TTGAGATCTT GTTCAAAATG
241 TCCAATATTC CCATTCCTAA AATGCCTTCC ATGATGCTTG GGTGTGTGGT CATCAACCTG
301 TTTTCTTACA CCAGGCCAGG CTCTTTGCTT CATCGGATGT TTTTCCCGGA CGACGGGAGG
361 CCAAAGGTTG CCGAGACCGG GGGTGCATTC GGGTTTGTAA TGTACTGGTT CCTTAAAGGC
421 GTGTCTATAG ACGTTGGGAT GCTTAGAAAA ACCGAACCGA GGGCTGCTTT AATTGGGTTC
481 AATACATTGG TCATCCCATA TATATCCGGT TACATTCTAA TGAGGACTAG GAAACATTTT
541 GGGAAGTTGG CAATGACGGA ACTTCAATAC CAGGAAATCA TATTATTGCA AAGTTTATCA
601 TCATTTGCTG GTGTGAATGG ACTCTTGACA GATCTCAAGA TCAACCATTC CGAGTTTGGA
661 CGAATGGTTC AGTCTTGTGC CGCGGTCACT GACTTAGTAA TCTTTATAAT GGTCTCCGGG
721 ACCGTTCTTT TAAAAGGACA AAAAGGTTTA CCACATGGTA TTGTTATCGT TTTGGTTATA
781 GGCTTCTTGG TCTACATCGT ATGGCCGGTC ATGTTATGGA TTATCAAGCA GACACCAGAA
841 GGCAGGCTGG TTAAAGATGT CTACATTTAC TTGGTTATGG CTACCGCATA TTTTGTTTAC
901 ATGTTTTGGC TTAATTTCTT TCAATTCTCA ACATATGGCT GGTTTATTAT CGGTTTGGCT
961 ACCCCGGCTG GGCCTCCACT CGGATCGGCT CTCATTCAAA GATTTGAATG TTTTAACGTT
1021 GGTGTTTTGT TGCCGCTCTT TGGATCTCTT AGCATGGAAC AACTAGATAT ATCGTGGTTG
1081 ATGCGAGAGA TACTGAACCT TAAACACATG GAGGGCTTCG CTTATGAAGC TATTTCGGTT
1141 ATCTTGATCG TCACCGTGGT TAAATTTGTC GTCACAGCAA TAACTGCTTT TGCTGTGAGA
1201 ATTCCATACC GAGACTCCAT TGTTTTAGCC ATGGTTTTGT CAAATAGAAG TATCTTTGAG
1261 CTCGGCTACC TCGGCTACAT TGTCGAACTT AAAATGTTCG ACAACAAGAG CTTCACGATC
1321 GCGGCTCTAT CAGTACTTGT CAGCTCGCTA TTGACACCGA TCGCGATAGA ATTCATGTAC
1381 GAACCACAAC ATATCTTTAG TAGTTACCGA GATAGGAACA TGTTAACCTT GAAACATGAC
1441 TCTAAGCTGA AGACCCTTGT GTGTATTCAC AAGCCTGACC ACATAACATC CATGGTCAAC
1501 TTTGTGGAAC TTTTTAACCC AACACAAGAA TCAAAATTAG AATGCAATGT TCTTCACCTT
1561 GTGGAGCTCA TAGGTCAGGC CATTCCTACC TTCATTTCCC ACAAGATGCA AAAGCCGAAG
1621 GTTGGAACAC GCTCTTGCTC CCGCAATGTC ATAACTGCAT TCTTAAGCCT TCGTAGACAT
1681 TTAACCAAAG AGGCAATTTC CATTGACATC TTTACATCTG CTAGCTTGGT AGAGCACATG
1741 CACGAGGACC TCTGTTGGCT TGCCCTTGAC AAGAATGTAG CTCTCGTTGT ACTTCCTTTT
1801 CACCGTTCTT GGTCTGTTGA CCGCTCAACC ATTGTCTCTG ACGACAAGGC CATGCAGAAT
1861 CTCAACCACA AAGTCTTGAA AAGAGCGTCT TGCTCTGTTG GAATCTTCGT CTACCGGAAA
1921 CCTTTATGGG AATCTCAAAT GCACGGCTCA TGTTACAAGG TGTGTGCAAT AGTTGTGGGA
1981 GGGAAAGACG ATAAAGAAGC CTTAGCATTC ACCAACCGTA TGAGGAGAAA CAAGCAGACA
2041 AGCGTAACCA TCTTACACCT CATACCTCAA CTTACTACCG AGGAAAGCGA AGACTCGGTG
2101 CAGAAGTTGG ATTACGATGA CATAAAAGAG ATAATGAAGA CTGAGGATTC AAATGAAAAT
2161 GATTCATGGA TATGTATAGA AAAAAGCGTC AAAGAAGGGG CTGAGACTTC AGTGATACTT
2221 AGATCAATAG CGTATGATTA TGATTTGTTT ATAGTTGGAA GAAGTAGCGG AATGAATAGC
2281 GCAGTTACAA AAGGATTAAA TGAATGGACA GAGTTCGAGG AACTTGGAGC CCTCGGAGAT
2341 GTTATAGCGT CAAAGGAGTT TCCTTCAAGG GCATCTGTCT TGGTCTTGCA ACAGCAACAA
2401 TATTAG
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Revised Predicted Protein Sequence (801 aa):
1 MDPFNASWWT NMAWHGYSLS EDGTKFCEML PTKINSFGLS EKILHKSVGL YFWEYPLPNL
61 ELIILSVFFF WQFFEILFKM SNIPIPKMPS MMLGCVVINL FSYTRPGSLL HRMFFPDDGR
121 PKVAETGGAF GFVMYWFLKG VSIDVGMLRK TEPRAALIGF NTLVIPYISG YILMRTRKHF
181 GKLAMTELQY QEIILLQSLS SFAGVNGLLT DLKINHSEFG RMVQSCAAVT DLVIFIMVSG
241 TVLLKGQKGL PHGIVIVLVI GFLVYIVWPV MLWIIKQTPE GRLVKDVYIY LVMATAYFVY
301 MFWLNFFQFS TYGWFIIGLA TPAGPPLGSA LIQRFECFNV GVLLPLFGSL SMEQLDISWL
361 MREILNLKHM EGFAYEAISV ILIVTVVKFV VTAITAFAVR IPYRDSIVLA MVLSNRSIFE
421 LGYLGYIVEL KMFDNKSFTI AALSVLVSSL LTPIAIEFMY EPQHIFSSYR DRNMLTLKHD
481 SKLKTLVCIH KPDHITSMVN FVELFNPTQE SKLECNVLHL VELIGQAIPT FISHKMQKPK
541 VGTRSCSRNV ITAFLSLRRH LTKEAISIDI FTSASLVEHM HEDLCWLALD KNVALVVLPF
601 HRSWSVDRST IVSDDKAMQN LNHKVLKRAS CSVGIFVYRK PLWESQMHGS CYKVCAIVVG
661 GKDDKEALAF TNRMRRNKQT SVTILHLIPQ LTTEESEDSV QKLDYDDIKE IMKTEDSNEN
721 DSWICIEKSV KEGAETSVIL RSIAYDYDLF IVGRSSGMNS AVTKGLNEWT EFEELGALGD
781 VIASKEFPSR ASVLVLQQQQ Y
›› Fasta: All CHX Protein Sequences
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Back to the Top · Last Revision: October 16, 2006 |
