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AtCHX12 / At3g44910 ›› ARAMEMNON · TAIR · PLANTS T · MIPS · TIGR
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Exon/Intron Map (revised by K. Bock):
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Sequences ›› cDNA [ None Available ] · BAC F28D10 [ ATG-STOP: 35184 - 32669 ]
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Genomic DNA (3516 bp):
Revised predicted coding sequence in blue.
Start: 500 bp before ATG; End: 500 bp after STOP
1 tgacaatctg aggattcaaa ccggaagaat attcaagaaa caatagaaga gaaaaagaca
61 aaaaaaaatt aaggaaaaat taaagagaca aacgagctct cattaaaagt atacttttac
121 agattattag gattctactt attgtgaagt actcatagaa aaaaaaatta tgtgtggatt
181 agtgtttcta aatttgaggg tcaattagta acagaaaata tttgttgtca gcaaataaaa
241 ctctgtactt ttgtgtgtgt tttatgtata gattttccag cttgtaattc atccagcaaa
301 tcatacccat caatatccaa acagtttttg actaactaac tctcagacaa aaaaaaaaat
361 caagaccaaa acaaagtaaa caacaaaaat gacacgatca ccactgaaat tcatatgcaa
421 aaactcacaa gttcttcaaa cctttttttt ttttttcctt cttatttctc cagagttgat
481 acaccaagtt tccacaattt ATGAATACAA CGAGCTATAT CCGCGGTTGC ATACCCTTAG
541 TATTCAACAT CTCTTCTTTT GGATTTTGGG AAAACCTAAA GTCACCGGAT GTGATTTTCG
601 GGTATTCATT GCCTCTCATG GAATTTCAGA TATTACTCAT ATTTGTATTC ATCATCATAA
661 TTCACAGTTT TCTTAAAAGC TTTGGCATTT CCCCGATTCC CTCTTATATG TTGgtaagta
721 tccttgtaca tgaaacttga cggtcacgta acaggaaaaa tagatgtaac ttgacaagca
781 cgaaaacgtt ttaagcaaca tttgacaatc ctacatgcta ataaatgtat atttatgttc
841 agGCTGGTCT GATTCTGGGG CCTCAATTGT TCAATCTTAG GGAGGTATCA TCAAGGAAAT
901 TATCGTGGGA TCCTGCACTA GATGGAAACG GGCCGCTACG AGGCCTTTCG GTGTGTGGAA
961 ACATTATGCT TGCATTTTTT ATGACAGTCA AAATCAGCCG TCGATTGGCA TTCAACAACG
1021 GATGGCTACC CATCGTGATA GGGACTTTGA GCTTCATTGT TCCTTTTTTG GGTGGCTTCT
1081 GTGTGAGAAA CCTCCACACT GATAATATAG ACCCTTACTA CATGTCGCCG AATAAAGTCC
1141 TTGCCGAGCG CATTGTGGTC ATCTCGAGCC AATCCTCGAT TCTCTTGCCT ACCGTCGTTC
1201 ATTTCCTGTC AGAACTCAAG ATCCTCAATT CAGAGCTTGG TCGCCTTGTG TTGTCTGCAT
1261 CCCTTATCAA TGACATCTTC GCGTCTACTG TCAGCATTTT CGCCTATCTT GTGGGAACGT
1321 ACAAGAACAT CTCTCCCATG ACAGCATATC GTGACCTTAT AGCGGTGATC ATTTTGATTC
1381 TAGTAGCCTT TTGCGTTTTA AGGCCGGTCG TAGAATGGAT AGTAGAACGC ACACCAGAAG
1441 GCAAACCTGT GGCAGATGTG TATGTACATG CTGTGGTTTT GAGCGTAATT GCTTCCGCCG
1501 CATACTCTTC ATTTTTTAAT ATGAAATACC TTTTGGGACC ATTCTTACTC GGCATCATCA
1561 TACCAGAAGG TCCACCTATA GGATCTGCCT TGGAAGCCAA GTATGAGGCT CTCACAATGA
1621 ACGTGCTAAT ACCAATCTCA ATCACATTCA GCACGATGAG ATGCGATGTG ATGAAGATCG
1681 TCTACCAATA TGATGACATT TGGTACAACA TCTTCTTAAT GACATTTACG GGCTTTTTGA
1741 AAATGGCGAC CGGGATGGTA CCTTGCTTGT ACTGCAAGAT ACCATTCAAG GAGGCAATAG
1801 CCGCTTCCCT TCTTCTATGC TCTAAGAGTT TCTCTGAAAT CTTTCTCTAC GAATCAACAT
1861 ACGACGATTC Ggtaacttcc ctaccaatcc ataatccatt tcgtcatgat cttcacatat
1921 ttatatggtt tgtttgtttt tgcagTATAT ATCGCAAGCA ACATATACAT TCTTGATCAC
1981 TTGTGCTCTA ATAAACTCTG GAATTATCCC CACAGCCTTG GCCGGACTAT ATGACCCGAA
2041 GCGGAAGTAC GTTGGTTACC AAAAAAAGAA CATCATGAAT CTAAAACCAG ATTCAGATCT
2101 CCGGATCTTG ACTTGTATAC ATAGACCTGA GAACATCTCT GCGGCCATTT CATTTCTCCA
2161 ATTTTTGCCC TCCACCATTG TGGTCACAGT CCTCCATCTC GTTAAGCTTG TTGGCAAAAC
2221 CGTTCCCGTC CTAATCTCAC ACAACAAGCA AATAAATCGT GTAGTAACTA ACTCCTACAT
2281 CCATACCGCC AACCTTGCCT TCAGCCAGTT GGAGTCAGTG ACCATGACCA TGTTCACTGC
2341 CATCACGCAC GAGAACTTAA TGCACGATGA AATTTGCAAG GTCGCTTTGG AACAAGCCAC
2401 ATCGATTATT ATCGTCCCCT CGGGGAGGAA ATGGACCGTA GATGGGGCGT TTGAGTCAGA
2461 GGACGAAGCT ATAAGACGTC TCAATGAGTC ACTCCTCAAG AGTGCATCTT GTTCTATTGG
2521 GATTCTTGTG GACCGTGGAC AGTTGTCGCT GAAAGGAACA AGAAAATTTA ATATCGACGT
2581 TGGTGTGATC TTCATTGGAG GCAAAGACGA TCGGGAGGCA CTCTCGTTGG TGAAAAAGAT
2641 GAAGCAAAAC CCTAGAGTCA AAATCACTGT GATCCGACTC ATCTCTGACC GAGAAACAGA
2701 GTCGACTAAT TGGGATTACA TTCTTGATCA CGAGGTTTTA GAGGATCTTA AAGATACAGA
2761 GGCCACAAAC TCTATTGCAT ATACAGAGAG GATTGTGACT GGAGGTCCAG AAGTGGCCAC
2821 TACCGTCCGA TCACTCTCTG AGGATTATGA TCTTATGGTA GTTGGGAGAG ATCATGGCAT
2881 GGCATCACCG GACTTCGATG GACTCATGGA GTGGGTCGAA CTACCCGAGT TAGGTGTCAT
2941 TGGAGATTTG CTAGCGTCTA GAGAACTCGA CTCTAGGGTT TCTGTTTTGG TAGTCCAACA
3001 ACAACAACAA ACGTGAaaat gttctgtttg tttgtgtata acatatttat tagaaggtgt
3061 tcatatatac atttctcatt cttttaagag gttttcacta ttgcaggact aaaattagaa
3121 aaaaaagaag atgttccatt aaaacttcac aacaagaccg atgagacgga accgagagaa
3181 taaaagagtt cagaacatgg ctaaagtaca cataacataa ctaacatatt aaatgctatt
3241 gtttcgggcc tgagattgca ataattacag gtttgggccg aaaatctatt aaaaaagaaa
3301 aaaaagaaca taactaacgt atgcaaaaaa aaaaaaaaaa aaattagatt ctgtttttat
3361 atttaaaatc cgtaattgag atttgagaaa agaaaaaaaa aactaatttt atatgtaacc
3421 aatttttaag ccaaaactcg gaaaaaaaca tctctaacta ttcacagatt gaaataggtt
3481 gaaatatata caacattcaa aaacattgta atcatt
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Revised Predicted Coding Sequence (2313 bp):
1 ATGAATACAA CGAGCTATAT CCGCGGTTGC ATACCCTTAG TATTCAACAT CTCTTCTTTT
61 GGATTTTGGG AAAACCTAAA GTCACCGGAT GTGATTTTCG GGTATTCATT GCCTCTCATG
121 GAATTTCAGA TATTACTCAT ATTTGTATTC ATCATCATAA TTCACAGTTT TCTTAAAAGC
181 TTTGGCATTT CCCCGATTCC CTCTTATATG TTGGCTGGTC TGATTCTGGG GCCTCAATTG
241 TTCAATCTTA GGGAGGTATC ATCAAGGAAA TTATCGTGGG ATCCTGCACT AGATGGAAAC
301 GGGCCGCTAC GAGGCCTTTC GGTGTGTGGA AACATTATGC TTGCATTTTT TATGACAGTC
361 AAAATCAGCC GTCGATTGGC ATTCAACAAC GGATGGCTAC CCATCGTGAT AGGGACTTTG
421 AGCTTCATTG TTCCTTTTTT GGGTGGCTTC TGTGTGAGAA ACCTCCACAC TGATAATATA
481 GACCCTTACT ACATGTCGCC GAATAAAGTC CTTGCCGAGC GCATTGTGGT CATCTCGAGC
541 CAATCCTCGA TTCTCTTGCC TACCGTCGTT CATTTCCTGT CAGAACTCAA GATCCTCAAT
601 TCAGAGCTTG GTCGCCTTGT GTTGTCTGCA TCCCTTATCA ATGACATCTT CGCGTCTACT
661 GTCAGCATTT TCGCCTATCT TGTGGGAACG TACAAGAACA TCTCTCCCAT GACAGCATAT
721 CGTGACCTTA TAGCGGTGAT CATTTTGATT CTAGTAGCCT TTTGCGTTTT AAGGCCGGTC
781 GTAGAATGGA TAGTAGAACG CACACCAGAA GGCAAACCTG TGGCAGATGT GTATGTACAT
841 GCTGTGGTTT TGAGCGTAAT TGCTTCCGCC GCATACTCTT CATTTTTTAA TATGAAATAC
901 CTTTTGGGAC CATTCTTACT CGGCATCATC ATACCAGAAG GTCCACCTAT AGGATCTGCC
961 TTGGAAGCCA AGTATGAGGC TCTCACAATG AACGTGCTAA TACCAATCTC AATCACATTC
1021 AGCACGATGA GATGCGATGT GATGAAGATC GTCTACCAAT ATGATGACAT TTGGTACAAC
1081 ATCTTCTTAA TGACATTTAC GGGCTTTTTG AAAATGGCGA CCGGGATGGT ACCTTGCTTG
1141 TACTGCAAGA TACCATTCAA GGAGGCAATA GCCGCTTCCC TTCTTCTATG CTCTAAGAGT
1201 TTCTCTGAAA TCTTTCTCTA CGAATCAACA TACGACGATT CGTATATATC GCAAGCAACA
1261 TATACATTCT TGATCACTTG TGCTCTAATA AACTCTGGAA TTATCCCCAC AGCCTTGGCC
1321 GGACTATATG ACCCGAAGCG GAAGTACGTT GGTTACCAAA AAAAGAACAT CATGAATCTA
1381 AAACCAGATT CAGATCTCCG GATCTTGACT TGTATACATA GACCTGAGAA CATCTCTGCG
1441 GCCATTTCAT TTCTCCAATT TTTGCCCTCC ACCATTGTGG TCACAGTCCT CCATCTCGTT
1501 AAGCTTGTTG GCAAAACCGT TCCCGTCCTA ATCTCACACA ACAAGCAAAT AAATCGTGTA
1561 GTAACTAACT CCTACATCCA TACCGCCAAC CTTGCCTTCA GCCAGTTGGA GTCAGTGACC
1621 ATGACCATGT TCACTGCCAT CACGCACGAG AACTTAATGC ACGATGAAAT TTGCAAGGTC
1681 GCTTTGGAAC AAGCCACATC GATTATTATC GTCCCCTCGG GGAGGAAATG GACCGTAGAT
1741 GGGGCGTTTG AGTCAGAGGA CGAAGCTATA AGACGTCTCA ATGAGTCACT CCTCAAGAGT
1801 GCATCTTGTT CTATTGGGAT TCTTGTGGAC CGTGGACAGT TGTCGCTGAA AGGAACAAGA
1861 AAATTTAATA TCGACGTTGG TGTGATCTTC ATTGGAGGCA AAGACGATCG GGAGGCACTC
1921 TCGTTGGTGA AAAAGATGAA GCAAAACCCT AGAGTCAAAA TCACTGTGAT CCGACTCATC
1981 TCTGACCGAG AAACAGAGTC GACTAATTGG GATTACATTC TTGATCACGA GGTTTTAGAG
2041 GATCTTAAAG ATACAGAGGC CACAAACTCT ATTGCATATA CAGAGAGGAT TGTGACTGGA
2101 GGTCCAGAAG TGGCCACTAC CGTCCGATCA CTCTCTGAGG ATTATGATCT TATGGTAGTT
2161 GGGAGAGATC ATGGCATGGC ATCACCGGAC TTCGATGGAC TCATGGAGTG GGTCGAACTA
2221 CCCGAGTTAG GTGTCATTGG AGATTTGCTA GCGTCTAGAG AACTCGACTC TAGGGTTTCT
2281 GTTTTGGTAG TCCAACAACA ACAACAAACG TGA
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Revised Predicted Protein Sequence (770 aa):
1 MNTTSYIRGC IPLVFNISSF GFWENLKSPD VIFGYSLPLM EFQILLIFVF IIIIHSFLKS
61 FGISPIPSYM LAGLILGPQL FNLREVSSRK LSWDPALDGN GPLRGLSVCG NIMLAFFMTV
121 KISRRLAFNN GWLPIVIGTL SFIVPFLGGF CVRNLHTDNI DPYYMSPNKV LAERIVVISS
181 QSSILLPTVV HFLSELKILN SELGRLVLSA SLINDIFAST VSIFAYLVGT YKNISPMTAY
241 RDLIAVIILI LVAFCVLRPV VEWIVERTPE GKPVADVYVH AVVLSVIASA AYSSFFNMKY
301 LLGPFLLGII IPEGPPIGSA LEAKYEALTM NVLIPISITF STMRCDVMKI VYQYDDIWYN
361 IFLMTFTGFL KMATGMVPCL YCKIPFKEAI AASLLLCSKS FSEIFLYEST YDDSYISQAT
421 YTFLITCALI NSGIIPTALA GLYDPKRKYV GYQKKNIMNL KPDSDLRILT CIHRPENISA
481 AISFLQFLPS TIVVTVLHLV KLVGKTVPVL ISHNKQINRV VTNSYIHTAN LAFSQLESVT
541 MTMFTAITHE NLMHDEICKV ALEQATSIII VPSGRKWTVD GAFESEDEAI RRLNESLLKS
601 ASCSIGILVD RGQLSLKGTR KFNIDVGVIF IGGKDDREAL SLVKKMKQNP RVKITVIRLI
661 SDRETESTNW DYILDHEVLE DLKDTEATNS IAYTERIVTG GPEVATTVRS LSEDYDLMVV
721 GRDHGMASPD FDGLMEWVEL PELGVIGDLL ASRELDSRVS VLVVQQQQQT
›› Fasta: All CHX Protein Sequences
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Back to the Top · Last Revision: October 16, 2006 |
