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AtCHX27 / At5g01690 ›› ARAMEMNON · TAIR · PLANTS T · MIPS · TIGR
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Exon/Intron Map (revised by K. Bock):
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Sequences ›› cDNA [ None Available ] · BAC F7A7 [ ATG-STOP: 65067 - 68002 ]
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Genomic DNA (3936 bp):
Revised predicted coding sequence in blue.
Start: 500 bp before ATG; End: 500 bp after STOP
1 tattttttgg tattttacac attttttttt tattatagtt ttattttttt gttgatcctg
61 atctttttta aattaatact tataaggagt attactaggt tgattattaa ttaatctttt
121 tttgttaggg atctaacttc atggatttag tagctaggtt ggttattata acatcaacat
181 gcaaaatata tattacaaac acacatgttt gtgcaatcaa tctcaggcta taatgatgat
241 catctgacca tgctcaagat ttttgtacca cacagaaaac atatatagaa aaccttaaaa
301 gtaggatgac ctctaaagag aaataaagaa caagaggata aacaacatgt acaattaaac
361 ccctaaatat agctagagag agcagaaaca aaaaaaagaa gagaataatt aatactttct
421 tcttttcttc aactcacaac acaatctctc tctttccctc tatggcttga ctctttaggg
481 gaaataccta gcaggaggga ATGGAAAATA TAACCAAAAC TTTTCAGTAC GGAGGAGTTG
541 ATTGGCTTTG CGAGCCATGG GTAGGTGCAG GCTCTTTGGG GATTGGCCGG GGAGAGAATC
601 CGCTCAAGTT TGCTCTTCCT CTTCTTCTCC TTCAGATTTC TGTCTTTTCC ATATTTTCCG
661 TATCTTTTCA GTTTCTTCTT CGGCCTTTTG GAAAATTTGC ATTCCTCACT CAGATGCTGg
721 tatacgtttc catatctaag catctataat tggaagcttt ctagtggaaa aatatggact
781 agtcgtctca aaaacatgta tagccatgcc cataatggtg taaatgtgac ttaatattta
841 atagtgaatt tgtttgcagG CTGGGATCTG CTTAGGACCG TCCGTTATAG GACGTAACAA
901 ACAGTACATG GCTACATTCT TCTACGCGAG AAGCGTGTAC ATAATCGAAT CCTTCGAGGC
961 CATATGTTTT CTCTTCATTT GCTACATCAC AACATGTCAA GTAGACACTA GGATGATAAA
1021 GAGAGTAGGC AAGTTAGCAT TCATAAACGG CATCTTACTT TTCCTCATAC CTTTCGTATG
1081 GGGCCAATTC GCGGCCATCT TGATCTCCAA GAGGCTCAAA AGCGGGCCTG CGGGGATCCC
1141 TCCCGTGGAG TTCCACCATG TAGCGATCGT CCAGTCCACA ATGTTTTTTC AGGTGGTTTA
1201 CGGAGTCTTG TCGAGCCTAA AGATGTTGAA CACTGAGCCA GGGAGGTTAG CACTTGCATC
1261 CATGATGGTG CATGACTGCC TCTCTTGGTG TTTTTTCATG CTTAACATCG CCATTAAACT
1321 TAATGTTGAC TTACCCAATA AAAATCGCGC TGCTTTCTTG TCCGTCTTAC AGgtacccaa
1381 gttgataaat aatttcttaa ttaatctaca aattttgctt tggaacatct tccaattttc
1441 ttactataaa aacataattg actgtgtaaa ttcctacaaa aatagacaaa ctaactaaga
1501 tcctaataaa atgcatgaat ccaataatat ttacgtatag tataaacttg ctttgatcta
1561 tatatacgct tttttattaa tgatataaag acggaaatga atgcagATGA TAATGATATT
1621 GGTGATAGCA TATGTGTTCC GACCACTAAT GCTGTGGATG AAGAATCGAA CACCAGAAGG
1681 ACACTCTCTC AAGGCCTCCT ATCTCTCTGT TATATGCGTC TTGCTCTTCA TCTCCTGCCT
1741 CTGGGCAGAA TTTGTGGGTT TACCTTACTT CTTTGGTGCG GTCGTCTTAG GTCTAGCCAC
1801 CCCAAAACGT CCGCCTCTAG GCACGGGACT GTCAGACAAA ATCGGTTGTT TTGTTTGGTC
1861 TGTCCTGATG CCTTGCTACG TCATTGGGAT TGGCCTCAAT ATCGATCTCT CACTGTTTTC
1921 CTGGAGAGAT GTTATCCGGT TTGAGCTACT TTTTGGGGTG GTCAGGTTTG CCAAAATGAT
1981 AGCCATTGCC TTGCCTTCCC TTTACTATAA AGTGCCTCTT TGGCACGCCA TTCTTGTCGG
2041 GTTTATCGTC AATATACAAG GACTTTACGA CGTTCAAATA TACAAACAGA ATTTCAATTA
2101 CACGgtaaca ataattcatt taggatatac tttggaacat atataatttt aggtcaataa
2161 caatcaataa tggtcaatgg gtgcagAAAA TATCAAGCAA ATCTTTTGGA GCAATGGTGA
2221 TGTCAGCAAC GGTAAACTCG ACAATTTTCA TAGTGATAGT GAAGAAACTG TACCAAACCA
2281 TGAGCAAACG CAACCCTTAC AAGAGACGTA CGGTGCAACA CTGCCGAGTG GAGGCTCCCC
2341 TAAGGATCCT CACTTGTTTC CGGAACCGTG AGGCGGTCCG CCCGGTGCTT GACCTCGTCG
2401 AACTCTCTCG TCCAGCCATC GGGTCTCCTC TCTCAGTCTT CGCGGTGAAT CTAGAAGAGC
2461 TTAATAACCA TAGTCTTCCC CTCCTTATCC ATCACACGCA AGAGATTAGT CCCTTCCTCG
2521 TGCCTAGCCG AAGGGACCAG ATCGTTAAGG CCTTCCACAA CTTCGAGAAG ACTAATCAGG
2581 AGACCGTGTT GATAGAGTGC TTCACGGCAG TGGCACCGCG AAAGACGATG CACGAGGACG
2641 TGTGTGCGAT TGCCTTTGAC CAGGAAACAG ATATTGTGAT CCTAACTCTT GATGCCGGGA
2701 TCGAGTTATG GGAGAGGCTC CTGTGTCGTA ATCTCCTGCA CAACTGTCCC TGCTCTGTTG
2761 CGCTTTTCAT AGACAGAGGA AGGCTCCCAG ATTTCAGGTT CGTTCCACTG AAAAAGCTTA
2821 CCATCAATAT TGGTGCTATC TTCTTAGGAG GACCAGATGA CCGTGAAATG CTTGCGTATG
2881 CAACACGCTT AGCCAGCCAT CCAAGCGTCG AGCTCCAAGT CTTCCGGCTC GTGGACCAGA
2941 ACGGCGTCTC TCCGCTCAGA GACATGGTCG AGAGGAATCA CGACATGAGA GTCATCAACG
3001 TCTTCCGCAA AGAAAATTCC GAGAAAAACA TCATCTTCAG AGAGgtaatg agaactattt
3061 tgccttggct tggaagctat cttatttccc cttagacgaa accttctcta tgcaacagag
3121 gtttctattc ggtttagaaa gtttcttgtg tagacgaaac agaggttttt ctttatctaa
3181 cctatcataa tgtgttcccc tgtttctaac attcttaaag GTAAGAATAG AGGAAGCAGT
3241 GAATCTACTG GATCTACTAA GGAAGGAAGG GGACGACTTC GATCTGATGA TGGTCGGGAT
3301 AAGACACGAA GAAAATCTTT TGATGTTGGA AGGATTGTCA GAATGGAGCG ATATGAAGGA
3361 GTTAGGAGAG GTTGGAGATG TGTTGATCTC CAAAGATCTC GAGCTCTCTG TTTCGGTTCT
3421 CGCCGTACAG CAATGAgatt ggtgaccgtt tatctcgttt tcgttccccg agtttatgga
3481 tttgtacagc cttttgtaga atattgaata caaatttttt tctaaaaaag ttctaccatt
3541 caagaagata tcttgtttac ttatatcttt caaatcattc cagagcatgt gatcaccaat
3601 gaaatttcaa cagagattaa cagattgttc aatcatttgg tttagttaag tacttaccat
3661 ctttactttt ttttttgtag ctgttcaggt taatgcattt gctgcacaaa aagaacttat
3721 gaatcttgaa caactgtgag gttgaaattt ggatttgcgg aaaagaagac caagtccatt
3781 agtttgtcta ctctttttac tttttaatag cttcaaaaaa caaacagaac acaaaattat
3841 ttcacacaca aataaagttg atgttgagta atatcgacac ctcaacaggt tcaaatttta
3901 ctaaacagtt agaaacaaca acagtaacaa ttatcc
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Revised Predicted Coding Sequence (2304 bp):
1 ATGGAAAATA TAACCAAAAC TTTTCAGTAC GGAGGAGTTG ATTGGCTTTG CGAGCCATGG
61 GTAGGTGCAG GCTCTTTGGG GATTGGCCGG GGAGAGAATC CGCTCAAGTT TGCTCTTCCT
121 CTTCTTCTCC TTCAGATTTC TGTCTTTTCC ATATTTTCCG TATCTTTTCA GTTTCTTCTT
181 CGGCCTTTTG GAAAATTTGC ATTCCTCACT CAGATGCTGG CTGGGATCTG CTTAGGACCG
241 TCCGTTATAG GACGTAACAA ACAGTACATG GCTACATTCT TCTACGCGAG AAGCGTGTAC
301 ATAATCGAAT CCTTCGAGGC CATATGTTTT CTCTTCATTT GCTACATCAC AACATGTCAA
361 GTAGACACTA GGATGATAAA GAGAGTAGGC AAGTTAGCAT TCATAAACGG CATCTTACTT
421 TTCCTCATAC CTTTCGTATG GGGCCAATTC GCGGCCATCT TGATCTCCAA GAGGCTCAAA
481 AGCGGGCCTG CGGGGATCCC TCCCGTGGAG TTCCACCATG TAGCGATCGT CCAGTCCACA
541 ATGTTTTTTC AGGTGGTTTA CGGAGTCTTG TCGAGCCTAA AGATGTTGAA CACTGAGCCA
601 GGGAGGTTAG CACTTGCATC CATGATGGTG CATGACTGCC TCTCTTGGTG TTTTTTCATG
661 CTTAACATCG CCATTAAACT TAATGTTGAC TTACCCAATA AAAATCGCGC TGCTTTCTTG
721 TCCGTCTTAC AGATGATAAT GATATTGGTG ATAGCATATG TGTTCCGACC ACTAATGCTG
781 TGGATGAAGA ATCGAACACC AGAAGGACAC TCTCTCAAGG CCTCCTATCT CTCTGTTATA
841 TGCGTCTTGC TCTTCATCTC CTGCCTCTGG GCAGAATTTG TGGGTTTACC TTACTTCTTT
901 GGTGCGGTCG TCTTAGGTCT AGCCACCCCA AAACGTCCGC CTCTAGGCAC GGGACTGTCA
961 GACAAAATCG GTTGTTTTGT TTGGTCTGTC CTGATGCCTT GCTACGTCAT TGGGATTGGC
1021 CTCAATATCG ATCTCTCACT GTTTTCCTGG AGAGATGTTA TCCGGTTTGA GCTACTTTTT
1081 GGGGTGGTCA GGTTTGCCAA AATGATAGCC ATTGCCTTGC CTTCCCTTTA CTATAAAGTG
1141 CCTCTTTGGC ACGCCATTCT TGTCGGGTTT ATCGTCAATA TACAAGGACT TTACGACGTT
1201 CAAATATACA AACAGAATTT CAATTACACG AAAATATCAA GCAAATCTTT TGGAGCAATG
1261 GTGATGTCAG CAACGGTAAA CTCGACAATT TTCATAGTGA TAGTGAAGAA ACTGTACCAA
1321 ACCATGAGCA AACGCAACCC TTACAAGAGA CGTACGGTGC AACACTGCCG AGTGGAGGCT
1381 CCCCTAAGGA TCCTCACTTG TTTCCGGAAC CGTGAGGCGG TCCGCCCGGT GCTTGACCTC
1441 GTCGAACTCT CTCGTCCAGC CATCGGGTCT CCTCTCTCAG TCTTCGCGGT GAATCTAGAA
1501 GAGCTTAATA ACCATAGTCT TCCCCTCCTT ATCCATCACA CGCAAGAGAT TAGTCCCTTC
1561 CTCGTGCCTA GCCGAAGGGA CCAGATCGTT AAGGCCTTCC ACAACTTCGA GAAGACTAAT
1621 CAGGAGACCG TGTTGATAGA GTGCTTCACG GCAGTGGCAC CGCGAAAGAC GATGCACGAG
1681 GACGTGTGTG CGATTGCCTT TGACCAGGAA ACAGATATTG TGATCCTAAC TCTTGATGCC
1741 GGGATCGAGT TATGGGAGAG GCTCCTGTGT CGTAATCTCC TGCACAACTG TCCCTGCTCT
1801 GTTGCGCTTT TCATAGACAG AGGAAGGCTC CCAGATTTCA GGTTCGTTCC ACTGAAAAAG
1861 CTTACCATCA ATATTGGTGC TATCTTCTTA GGAGGACCAG ATGACCGTGA AATGCTTGCG
1921 TATGCAACAC GCTTAGCCAG CCATCCAAGC GTCGAGCTCC AAGTCTTCCG GCTCGTGGAC
1981 CAGAACGGCG TCTCTCCGCT CAGAGACATG GTCGAGAGGA ATCACGACAT GAGAGTCATC
2041 AACGTCTTCC GCAAAGAAAA TTCCGAGAAA AACATCATCT TCAGAGAGGT AAGAATAGAG
2101 GAAGCAGTGA ATCTACTGGA TCTACTAAGG AAGGAAGGGG ACGACTTCGA TCTGATGATG
2161 GTCGGGATAA GACACGAAGA AAATCTTTTG ATGTTGGAAG GATTGTCAGA ATGGAGCGAT
2221 ATGAAGGAGT TAGGAGAGGT TGGAGATGTG TTGATCTCCA AAGATCTCGA GCTCTCTGTT
2281 TCGGTTCTCG CCGTACAGCA ATGA
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Revised Predicted Protein Sequence (767 aa):
1 MENITKTFQY GGVDWLCEPW VGAGSLGIGR GENPLKFALP LLLLQISVFS IFSVSFQFLL
61 RPFGKFAFLT QMLAGICLGP SVIGRNKQYM ATFFYARSVY IIESFEAICF LFICYITTCQ
121 VDTRMIKRVG KLAFINGILL FLIPFVWGQF AAILISKRLK SGPAGIPPVE FHHVAIVQST
181 MFFQVVYGVL SSLKMLNTEP GRLALASMMV HDCLSWCFFM LNIAIKLNVD LPNKNRAAFL
241 SVLQMIMILV IAYVFRPLML WMKNRTPEGH SLKASYLSVI CVLLFISCLW AEFVGLPYFF
301 GAVVLGLATP KRPPLGTGLS DKIGCFVWSV LMPCYVIGIG LNIDLSLFSW RDVIRFELLF
361 GVVRFAKMIA IALPSLYYKV PLWHAILVGF IVNIQGLYDV QIYKQNFNYT KISSKSFGAM
421 VMSATVNSTI FIVIVKKLYQ TMSKRNPYKR RTVQHCRVEA PLRILTCFRN REAVRPVLDL
481 VELSRPAIGS PLSVFAVNLE ELNNHSLPLL IHHTQEISPF LVPSRRDQIV KAFHNFEKTN
541 QETVLIECFT AVAPRKTMHE DVCAIAFDQE TDIVILTLDA GIELWERLLC RNLLHNCPCS
601 VALFIDRGRL PDFRFVPLKK LTINIGAIFL GGPDDREMLA YATRLASHPS VELQVFRLVD
661 QNGVSPLRDM VERNHDMRVI NVFRKENSEK NIIFREVRIE EAVNLLDLLR KEGDDFDLMM
721 VGIRHEENLL MLEGLSEWSD MKELGEVGDV LISKDLELSV SVLAVQQ
›› Fasta: All CHX Protein Sequences
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Back to the Top · Last Revision: October 16, 2006 |
