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AtCHX06b / At1g08135 ›› ARAMEMNON · TAIR · PLANTS T · MIPS · TIGR
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Exon/Intron Map (revised by K. Bock):
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Sequences ›› cDNA [ N/A ] · BAC T6D22 [ ATG-STOP: 107368 - 104714 ]
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Genomic DNA (3655 bp):
Revised predicted coding sequence in blue.
Start: 500 bp before ATG; End: 500 bp after STOP
1 tgttatcaca attcaaaaat atatattctc ttgtagtaac agggtctgtt taacatacac
61 actttgtcac gttataatta agtttagtat gtgttagaga tatcagaggg aacagagcaa
121 aatactctgt ttttctcaac aaaaagagat tttggtacct aacagagtac tctgctctgt
181 tccctttgat aaaagattga atttgaggtc ttaattaatg gatcatctta ttaaaaatgg
241 gtaaagcgtt tatttagact gcctaaagag gtcattttat tttaaagtaa tacaacttac
301 aagcgccaaa aacaaagaca acacctggac gagacaatcc ctatatttat acccttatcc
361 taattttaga gatcctttgg gatctgtgtg aaaccatcag accggtttta attttagttc
421 tttttttgac tgcaaaatct tttcattgtc aatttttttt tttgttcttt ttggttttac
481 gtagacaaga tttgtcccaa ATGGATGCAG AAAATGCGAC TTGGCGCAAA GAGTTCATGT
541 GGAACAACGA TGAGAAAAGA GCAGAGATGG GGACGAAGAT GTTTTGCGAT GTAAGTCCAC
601 ATATAATGTT GAACTCACAT GGCGTTGCAG AGAAAATGGC TTCCGGATCT AAGGGAATGG
661 ATTTTTGGGA GTACCCTCTT CCACAATTGG AGATCATTAT TCTCTCCATA TTCCTATTAT
721 GGCGTTTATT TGATATGTTG TTCAAGAAGT TAGGTGTTCC TATCCCCAAG TTCACCTCCA
781 TGATGCTTgt acgtaattac gggtttcaaa tatccgcatg tcattgggga tgttcgaata
841 atataacaca ttttcttttc ttgttcttga agGTCGGAGC AGTCTTAAGT GAGATGTTTG
901 GATCTATGCA AATACCATGT TTAAAGCATA TATTTATCCA TTATAACCAG TATATGACAA
961 AGGTTCCTGA TACTATAGGC GCATTTGCTT TTGTCCTAGA TTGGTTTCTA AGGGGAGTGA
1021 CTACAGATGT TGGAATAATG AAAAAGTCAG GAACTAAGAG TGTTGTAATT GGGATCACCT
1081 CAATGATCAT CCCATGGCAA ATAGGAAAAC TCCTTTATTC ATCTAGAGAG AAATCAAGTA
1141 TTCTGACCAT GACAGAAATG GAGTATACCG TAATGACATT CACAATGAGC ATGACGCCTT
1201 TCACTTGCGT CAACATGTTG CTTACTGACC TCAAGATAGT TCACACTGAT TTCGGCCAAA
1261 TAGCTCAGTC AGCGGGAATG GTAACAGATT TGCTTGCCTT TTTCTTGACT GTATCGGCTT
1321 ACGTTAGCCG TGATGAAACT CAAGGAGTGA AAATGGGATT AGCTTTTATG GCATTCTTTA
1381 TTTTTGTGTA CCTTGTGCGA CAATTTATGC TTTGGGTTAT AAGACATACG CCAGAAGGAG
1441 CCCCGGTGAA GAACGTCTAT CTCTACATTG GTCTCTTGCT TGCTTACTTA TCTTATCTTT
1501 ATTGGAGCCG CTTCTTATTC TTCGGACCGC TAGGGGCATT TGCTCTTGGT TTGGCTGTCC
1561 CTAACGGGCC GCCATTAGGA TCAGTATTTA TACAAAAATT CGATAGCTTC AACGAGGGCA
1621 TTTTTTTACC CCTCTTTGGA TCACTTAGCA TGATCAAACT AGATTGGTCA TTTCTACGAA
1681 AGGAGTTTGG AAATGGAAGG CATCTCCATG GACATATGTA CGAGTGTTTT TCCTTCCTTC
1741 CCATCGTATA CATAGCGAAA TTCGCTACTT CGTTTTTAGC CGCCTTAGCT ACAAAGATAC
1801 CTTTGAGAGA CTCAATTATC CTAGGTGTCA TTATGGGCAC CAAGAGTAGT TTCGAGTTGG
1861 GTTACGTACT TACAGCCTTC GAAAAAGACg taagaatatt ttagctatac tcatataacg
1921 gatatgatga tcatcttaat ttgtatatat atttctgttt taatgtttct catttttaac
1981 agAGGATTAG TCTGGAGGTC TTGTCGCTCC TGGGCGTATA CATTCTCGTA AACTCTTTGT
2041 TAACACCAAT GGCTATACAT TTCCTGTATG ACCGGTCTAA GAGATTTGTG TGTTACGGAA
2101 GAAGAAACTT GAAAGAGAAG CCAGAAATGC AAACGCTGGT GTGCATCAAC AAGCCTGACA
2161 ACATAACATC GATGATTAGC CTTCTTAGAG CAACTTCCCC ATCTAAAGAC TCTCCAATGG
2221 AATGTTGTGT TCTTCACCTA ATAGAGTTAT TGGGTCAAGC TACTCCCACG TTTATCTCCC
2281 ACCAGCTTCA AAAACCAAAG CCTGGAAGTC GGTCTTATTC CGAAAATGTC ATAAGCTCTT
2341 TCCAACTGTT TCAAGAGGTT TATTGGGACT CCGCTTCCAT AAACATGTTC ACGTCTTTAA
2401 CTTCCGCTAA AGAGATGCAT GAACAAATAT GTTGGTTTGC TCTTAGTCAA GGTTCCAATC
2461 TTATTCTCCT CTCGTTTCAC CGCACTTGGG AGCCTAACGG AAATGTCATT ATCTCAGACG
2521 ATCAAACCCT AAGAAGTCTT AATCTTAATG TTCTGAAACG CGCCCCTTGT TCTGTCGGAA
2581 TCTTTGTTTA TCGCAAACCA ATTTGGCAAA CCAAAGCCCT AGAATCTCCG TGCCGTgtaa
2641 gtaactacat tctttttttt ttgttttttt ttgtttattc taaatgatgt tgaatatttt
2701 ttattttcat acattaaatg cagGTGTGCT TGATTTACGT GGGTGGGAAT GACGACAAAG
2761 AGGCCCTGGC ATTAGCTGAC CACATGAGAG GTAACCAACA AGTGATTCTA ACGGTCTTGC
2821 GTCTGATCCC TACGTCTTAT GCCGATGAGA GTAGCTTGAG GATTCATAGC CAAATGGTAG
2881 ACATGAACCG TCATGAAGAC CAAAGGCCTG GAGATAAGTC AACCATCATT GACTGGACGG
2941 TGGGAGATGG CACAGAGACA TCCAAAATTT TGCACTCCGT GTCTTACGAC TATGATCTAT
3001 TCATAGTCGG TCGAAGAAGT GGGGTTGGTA CTACAGTCAC CAGAGGACTC GGGGATTGGA
3061 TGGAATTCGA AGAACTTGGA GTCATTGGAG ATTTGTTAGC ATCTGAATAT TTTCCTTCTA
3121 GAGCCTCCGT GTTAGTCGTC CAACAACAAG AGTGAgaagc atttatcctg aaattgagtt
3181 agcttcaatc ttggtttatt ttccttattg aaattaagat cctttacaaa caaagtgtaa
3241 cggatcttat aggaagcaca caatagattt ttttgtgttg taaggactac aaaacacatg
3301 ttcatcattc atgtataggg gagaaataca tatactaggt gatgagaagg taaatcatcg
3361 atcccacaaa ttaacaggcg gatttagtga agaaatacag ggtgcatgtg caaccactaa
3421 attattgaaa tatgtgtttt attttaattc tacactaaga tttgtatcct aattggccaa
3481 ttaaacaaga taaagattaa aagttgagga actcgtaaac agcccttcac gcgcttaatt
3541 ttttaatttt acggaaaaca gcaatttcgc atggatttcg gataggtggc gtctacgcgc
3601 tcattgtgcg aatgagtaag atacttagat ttcacagttc gataaccata cgcgt
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Revised Predicted Coding Sequence (2391 bp):
1 ATGGATGCAG AAAATGCGAC TTGGCGCAAA GAGTTCATGT GGAACAACGA TGAGAAAAGA
61 GCAGAGATGG GGACGAAGAT GTTTTGCGAT GTAAGTCCAC ATATAATGTT GAACTCACAT
121 GGCGTTGCAG AGAAAATGGC TTCCGGATCT AAGGGAATGG ATTTTTGGGA GTACCCTCTT
181 CCACAATTGG AGATCATTAT TCTCTCCATA TTCCTATTAT GGCGTTTATT TGATATGTTG
241 TTCAAGAAGT TAGGTGTTCC TATCCCCAAG TTCACCTCCA TGATGCTTGT CGGAGCAGTC
301 TTAAGTGAGA TGTTTGGATC TATGCAAATA CCATGTTTAA AGCATATATT TATCCATTAT
361 AACCAGTATA TGACAAAGGT TCCTGATACT ATAGGCGCAT TTGCTTTTGT CCTAGATTGG
421 TTTCTAAGGG GAGTGACTAC AGATGTTGGA ATAATGAAAA AGTCAGGAAC TAAGAGTGTT
481 GTAATTGGGA TCACCTCAAT GATCATCCCA TGGCAAATAG GAAAACTCCT TTATTCATCT
541 AGAGAGAAAT CAAGTATTCT GACCATGACA GAAATGGAGT ATACCGTAAT GACATTCACA
601 ATGAGCATGA CGCCTTTCAC TTGCGTCAAC ATGTTGCTTA CTGACCTCAA GATAGTTCAC
661 ACTGATTTCG GCCAAATAGC TCAGTCAGCG GGAATGGTAA CAGATTTGCT TGCCTTTTTC
721 TTGACTGTAT CGGCTTACGT TAGCCGTGAT GAAACTCAAG GAGTGAAAAT GGGATTAGCT
781 TTTATGGCAT TCTTTATTTT TGTGTACCTT GTGCGACAAT TTATGCTTTG GGTTATAAGA
841 CATACGCCAG AAGGAGCCCC GGTGAAGAAC GTCTATCTCT ACATTGGTCT CTTGCTTGCT
901 TACTTATCTT ATCTTTATTG GAGCCGCTTC TTATTCTTCG GACCGCTAGG GGCATTTGCT
961 CTTGGTTTGG CTGTCCCTAA CGGGCCGCCA TTAGGATCAG TATTTATACA AAAATTCGAT
1021 AGCTTCAACG AGGGCATTTT TTTACCCCTC TTTGGATCAC TTAGCATGAT CAAACTAGAT
1081 TGGTCATTTC TACGAAAGGA GTTTGGAAAT GGAAGGCATC TCCATGGACA TATGTACGAG
1141 TGTTTTTCCT TCCTTCCCAT CGTATACATA GCGAAATTCG CTACTTCGTT TTTAGCCGCC
1201 TTAGCTACAA AGATACCTTT GAGAGACTCA ATTATCCTAG GTGTCATTAT GGGCACCAAG
1261 AGTAGTTTCG AGTTGGGTTA CGTACTTACA GCCTTCGAAA AAGACAGGAT TAGTCTGGAG
1321 GTCTTGTCGC TCCTGGGCGT ATACATTCTC GTAAACTCTT TGTTAACACC AATGGCTATA
1381 CATTTCCTGT ATGACCGGTC TAAGAGATTT GTGTGTTACG GAAGAAGAAA CTTGAAAGAG
1441 AAGCCAGAAA TGCAAACGCT GGTGTGCATC AACAAGCCTG ACAACATAAC ATCGATGATT
1501 AGCCTTCTTA GAGCAACTTC CCCATCTAAA GACTCTCCAA TGGAATGTTG TGTTCTTCAC
1561 CTAATAGAGT TATTGGGTCA AGCTACTCCC ACGTTTATCT CCCACCAGCT TCAAAAACCA
1621 AAGCCTGGAA GTCGGTCTTA TTCCGAAAAT GTCATAAGCT CTTTCCAACT GTTTCAAGAG
1681 GTTTATTGGG ACTCCGCTTC CATAAACATG TTCACGTCTT TAACTTCCGC TAAAGAGATG
1741 CATGAACAAA TATGTTGGTT TGCTCTTAGT CAAGGTTCCA ATCTTATTCT CCTCTCGTTT
1801 CACCGCACTT GGGAGCCTAA CGGAAATGTC ATTATCTCAG ACGATCAAAC CCTAAGAAGT
1861 CTTAATCTTA ATGTTCTGAA ACGCGCCCCT TGTTCTGTCG GAATCTTTGT TTATCGCAAA
1921 CCAATTTGGC AAACCAAAGC CCTAGAATCT CCGTGCCGTG TGTGCTTGAT TTACGTGGGT
1981 GGGAATGACG ACAAAGAGGC CCTGGCATTA GCTGACCACA TGAGAGGTAA CCAACAAGTG
2041 ATTCTAACGG TCTTGCGTCT GATCCCTACG TCTTATGCCG ATGAGAGTAG CTTGAGGATT
2101 CATAGCCAAA TGGTAGACAT GAACCGTCAT GAAGACCAAA GGCCTGGAGA TAAGTCAACC
2161 ATCATTGACT GGACGGTGGG AGATGGCACA GAGACATCCA AAATTTTGCA CTCCGTGTCT
2221 TACGACTATG ATCTATTCAT AGTCGGTCGA AGAAGTGGGG TTGGTACTAC AGTCACCAGA
2281 GGACTCGGGG ATTGGATGGA ATTCGAAGAA CTTGGAGTCA TTGGAGATTT GTTAGCATCT
2341 GAATATTTTC CTTCTAGAGC CTCCGTGTTA GTCGTCCAAC AACAAGAGTG A
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Revised Predicted Protein Sequence (796 aa):
1 MDAENATWRK EFMWNNDEKR AEMGTKMFCD VSPHIMLNSH GVAEKMASGS KGMDFWEYPL
61 PQLEIIILSI FLLWRLFDML FKKLGVPIPK FTSMMLVGAV LSEMFGSMQI PCLKHIFIHY
121 NQYMTKVPDT IGAFAFVLDW FLRGVTTDVG IMKKSGTKSV VIGITSMIIP WQIGKLLYSS
181 REKSSILTMT EMEYTVMTFT MSMTPFTCVN MLLTDLKIVH TDFGQIAQSA GMVTDLLAFF
241 LTVSAYVSRD ETQGVKMGLA FMAFFIFVYL VRQFMLWVIR HTPEGAPVKN VYLYIGLLLA
301 YLSYLYWSRF LFFGPLGAFA LGLAVPNGPP LGSVFIQKFD SFNEGIFLPL FGSLSMIKLD
361 WSFLRKEFGN GRHLHGHMYE CFSFLPIVYI AKFATSFLAA LATKIPLRDS IILGVIMGTK
421 SSFELGYVLT AFEKDRISLE VLSLLGVYIL VNSLLTPMAI HFLYDRSKRF VCYGRRNLKE
481 KPEMQTLVCI NKPDNITSMI SLLRATSPSK DSPMECCVLH LIELLGQATP TFISHQLQKP
541 KPGSRSYSEN VISSFQLFQE VYWDSASINM FTSLTSAKEM HEQICWFALS QGSNLILLSF
601 HRTWEPNGNV IISDDQTLRS LNLNVLKRAP CSVGIFVYRK PIWQTKALES PCRVCLIYVG
661 GNDDKEALAL ADHMRGNQQV ILTVLRLIPT SYADESSLRI HSQMVDMNRH EDQRPGDKST
721 IIDWTVGDGT ETSKILHSVS YDYDLFIVGR RSGVGTTVTR GLGDWMEFEE LGVIGDLLAS
781 EYFPSRASVL VVQQQE
›› Fasta: All CHX Protein Sequences
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Back to the Top · Last Revision: October 16, 2006 |
