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AtCHX11 / At3g44920 ›› ARAMEMNON · TAIR · PLANTS T · MIPS · TIGR
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Exon/Intron Map (revised by K. Bock):
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Sequences ›› cDNA [ None Available ] · BAC F28D10 [ ATG-STOP: 40330 - 37643 ]
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Genomic DNA (3688 bp):
Revised predicted coding sequence in blue.
Start: 500 bp before ATG; End: 500 bp after STOP
1 ttagggtggt cactaatttt agaagtatta ttagaccaaa ataattatac ttataagtat
61 tatccaggga aggaaaaaac attaattata aacttatata gatcatatat tgaagcagtt
121 agaaaatatt tctagactaa atttatgtgt aatcggattt taagctatag acctaaactt
181 gggtccctga acagacactt tgtgctaatt ttggagcagt gtatcaaacc tcaaaacttg
241 caatttttta tttagcaaag caaattctcc atgaaagaac caactatttt ttttttcctc
301 tctgtggtat ttgttttcta aattggaaag ttccattagt tccagagaga tcatgacaaa
361 tacttaccaa agaccagaca aaaacatcac aataaactaa cacgacttct ttcaaaaccc
421 aaattcaaag acttgaaact ttatcacaca aagacggtat tttcatcccc aagttttgct
481 aatttcttgg acttatattc ATGAACACGA CTACTTACAT TGGGCATTGC CGGATATCAT
541 TCTTCAACAT ATCTTCTCAG GGATTTTGGG AGAACCTAAA ATCGCCTGAT GTGGTTTTCG
601 GGTACTCGTT GCCTCTCCTG GAGATTCAAA TAATATTGAT ATTCTTCTGC ATTGTCATGT
661 CTCATATGTT CCTCAGATGC ATCGGCGTTT CCCAGATCGT TTCATATATG ATTgtaagca
721 gctttccata tttaacttga caaacacata agagaaaagt agaactacaa aaataaagat
781 tttttgcatg ggaaaaaaca tgtatctaaa agatacaaaa gttaagattt gtatctatta
841 gaactacaaa agtagacatg taacttgaca tgcacgtaaa ttgtttaagg cgcatagaag
901 ataatgcgtg catgaagata gttttccaaa aataacatac tatatataaa tttatgtgca
961 gGCTGGACTA ATTCTAGGGC CTCAGCTTTT CGATATACTA GAGAAGTCTT CAGGAAAACT
1021 ATCGGCGGAT CCTGCGTTGG ATGGAACCGC AGCGTTAAGA TGCATTTCAG TATTTGGAAG
1081 ACTAATGTTT ACGTTTCTAA TGACTGTTAG GACCAGCAGG CGGGTGGCGT TCCATAGCGG
1141 AAAATTGCCA GTTGTGATCG GGATCGTGTC CTTCTTTGCT CCTTTGTTTA GTCTCAGTTT
1201 CCTGAACCTT TTCACTGACA ACATCGACCC TCACTACATG TCTTTAGACA AAGCCCTGGC
1261 CGAGCGCACT GTGATTGTCA TAACTCAGTC TCAGATACTT TTGCCTTCCA CTACATATAT
1321 ATTGCTAGAG CTCAAGATCA TCAACTCCGA GCTTGGTCGC CTTGCATTAT CTGCAAGTGC
1381 CATCAACGAC ATGTTGGGGA TTTTTGCCAT GATAGTCGCC ACTACACAAG CAACCTACAT
1441 TCATGTTTCA CATGCAATAG CTTACCGTGA CCTTGTCGCG GTGATCATCT TCTTTCTCAT
1501 CGTCTTTTTT GTTTTTAAGC CGATGGTGCA ATGGATCATA GACCGCACAC CCGAAGACAA
1561 GCCCGTGGAG GATATATACA TTCATGCCGT GATTCTGACA GCATTTGCTT CCGCGGCTTA
1621 TTTTGTGTTT TTCAACATGA AATACGTCTT AGGACCATTA ATTATCGGCA TCATCATACC
1681 AGAGGGTCCA CCGTTAGGAT CCGCTCTGGA GGCTAAGTTT GAGAGGCTCA CGATGAACGT
1741 GTTCTTACCA ATCTCAATCA CATTCAGCGC GATGAGATGT GATGGACTAA GGATCCTTAG
1801 CCAGTTCACT GACATCTACT TCAACATCTT CCTAACATTG CTTATACTTG TCATAAAACT
1861 GGTTGCTTGC CTTACACTTT GCTTGTACTA CAAGTTACCT CGCAGTGAAT CCTTGGCTGT
1921 TTCCCTCATC TTAAGCTACA AAAGTTTTGT TGAATTCGTT CTCTATGAAG CTGTATTAGA
1981 AGAAAAGgta acctcctaac ccacaaacga gtctattatt gttattattg attttgccgt
2041 aaatctaaac atgtttttat ggtttgattt tgcagTTCAT ATCACAGGCC ACTTACGCGT
2101 TCTTAATCCT ATATTCGCTA CTAAGTGCAG GGATTGTCCC TATGGTCGTA AGGAGCATGT
2161 ACGATCCGAA ACGAAAGTAC GTTAATTATC AGAAAAGGGA CATATTGCAT CTAGAAGCAA
2221 ACTCAGGTCT TCGAATTCTA ACTTGTTTGC ACAAACCAGA AAACGTCTCG GAGACCATAG
2281 CATTCCTCCA ATTGTTTTCC TCACCGATAC ATGACTTCCC TATCGCGGTC ACAGTTCTCC
2341 ACCTTGTGAA GCTAGTTGGT CAGATCAACC CTATCATAGT GTCACACGAC AAGAAGTTGA
2401 AGCGGCTTCA CAAAAACTCG TACATCCATA CCGCAAATCT TGCCTTTAGA CAGTTCATGC
2461 AAGAAAGCTT AGAGTCTGTA ACCGTGACTA CGTTCACCGC GTTCTCGCAT GAAAACTTGA
2521 TGCACGAAGA CATATGTACA CTTGCACTTG ATCGAACAAC ATCGATGATT GTCGTCCCAT
2581 CGGGGAGGAA ATGGACCGTA GATGGGATGT TCGAGTCTGA CGACCTTGCT GCAAGACAAC
2641 TAAACCAGTC ATTACTCGAT CGTGCGCCTT GTTCGATAGG CATACTAGTA GATCGTGGAC
2701 AATTCTCGCG GAAAAGCTAT GTAACGAGCA AGAATAGGTA CAACATTGAT GTTGGTGTGC
2761 TCTTCATTGG AGGCAAAGAC GATAGGGAGG CACTATCATT GGTGAAGAGG ATGAAATATA
2821 ACCCGCGGGT CCGTGTAACC GTGATCCGAC TCATCTTCGA CCATGAAATA GAGTCAGAGT
2881 GGGACTATAT TCTTGATAAC GAGGGCCTGA AGGATTTAAA GAGTACTGAA TCCAATGAAG
2941 ATATTCTTTA TACAGAGAGG ATTGTGACTA GTGTCGTTGA GGTAGTCAAA GCTGTCCAAT
3001 TGCTTGCAGA AGAGTACGAT CTAATGGTGG TCGGGAGAGA TCATGATATG ACATCACAAG
3061 ACTTATCAGG ACTAACGGAA TGGGTCGAAC TACCAGAGTT AGGTGTCATC GGGGATTTGC
3121 TGGCGGCTAG AGATCTAAAC TCTAAGGTCT CGGTTTTAGT AGTTCAACAA CAACAACAAC
3181 AAACGTGAca tgttttgacc gtaagactat gcgttctttt aggactaacc tttagaaaat
3241 tttaacatgt ataaatagtc attcatttgt ctaaatataa tatccataca aatctcttgg
3301 aatatcggca tcgctaaatt ccagttatac aatggcggcc acgcgaacaa taacaccaca
3361 atgatcagtc ctaaaatagt caaaacgact cttaacctca catgcattac atgatttttt
3421 ctctttggcc gcacgtttaa caaagactat gaaaccctta tgtaattaaa atacacatct
3481 ccacacacat atatcttcta aatgaattaa aaagcatcta attgattttt ccttaagttt
3541 tcaaaacttc aaaagatccc tttaaaacaa aaaaaaaatt gttgtggatc ttaattctga
3601 ttcaacttta agtgaccggt ttaggtgttg tggttaagag gaattgagga ccggttagat
3661 ggagtgtttt aaaccggatt gaagaggc
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Revised Predicted Coding Sequence (2352 bp):
1 ATGAACACGA CTACTTACAT TGGGCATTGC CGGATATCAT TCTTCAACAT ATCTTCTCAG
61 GGATTTTGGG AGAACCTAAA ATCGCCTGAT GTGGTTTTCG GGTACTCGTT GCCTCTCCTG
121 GAGATTCAAA TAATATTGAT ATTCTTCTGC ATTGTCATGT CTCATATGTT CCTCAGATGC
181 ATCGGCGTTT CCCAGATCGT TTCATATATG ATTGCTGGAC TAATTCTAGG GCCTCAGCTT
241 TTCGATATAC TAGAGAAGTC TTCAGGAAAA CTATCGGCGG ATCCTGCGTT GGATGGAACC
301 GCAGCGTTAA GATGCATTTC AGTATTTGGA AGACTAATGT TTACGTTTCT AATGACTGTT
361 AGGACCAGCA GGCGGGTGGC GTTCCATAGC GGAAAATTGC CAGTTGTGAT CGGGATCGTG
421 TCCTTCTTTG CTCCTTTGTT TAGTCTCAGT TTCCTGAACC TTTTCACTGA CAACATCGAC
481 CCTCACTACA TGTCTTTAGA CAAAGCCCTG GCCGAGCGCA CTGTGATTGT CATAACTCAG
541 TCTCAGATAC TTTTGCCTTC CACTACATAT ATATTGCTAG AGCTCAAGAT CATCAACTCC
601 GAGCTTGGTC GCCTTGCATT ATCTGCAAGT GCCATCAACG ACATGTTGGG GATTTTTGCC
661 ATGATAGTCG CCACTACACA AGCAACCTAC ATTCATGTTT CACATGCAAT AGCTTACCGT
721 GACCTTGTCG CGGTGATCAT CTTCTTTCTC ATCGTCTTTT TTGTTTTTAA GCCGATGGTG
781 CAATGGATCA TAGACCGCAC ACCCGAAGAC AAGCCCGTGG AGGATATATA CATTCATGCC
841 GTGATTCTGA CAGCATTTGC TTCCGCGGCT TATTTTGTGT TTTTCAACAT GAAATACGTC
901 TTAGGACCAT TAATTATCGG CATCATCATA CCAGAGGGTC CACCGTTAGG ATCCGCTCTG
961 GAGGCTAAGT TTGAGAGGCT CACGATGAAC GTGTTCTTAC CAATCTCAAT CACATTCAGC
1021 GCGATGAGAT GTGATGGACT AAGGATCCTT AGCCAGTTCA CTGACATCTA CTTCAACATC
1081 TTCCTAACAT TGCTTATACT TGTCATAAAA CTGGTTGCTT GCCTTACACT TTGCTTGTAC
1141 TACAAGTTAC CTCGCAGTGA ATCCTTGGCT GTTTCCCTCA TCTTAAGCTA CAAAAGTTTT
1201 GTTGAATTCG TTCTCTATGA AGCTGTATTA GAAGAAAAGT TCATATCACA GGCCACTTAC
1261 GCGTTCTTAA TCCTATATTC GCTACTAAGT GCAGGGATTG TCCCTATGGT CGTAAGGAGC
1321 ATGTACGATC CGAAACGAAA GTACGTTAAT TATCAGAAAA GGGACATATT GCATCTAGAA
1381 GCAAACTCAG GTCTTCGAAT TCTAACTTGT TTGCACAAAC CAGAAAACGT CTCGGAGACC
1441 ATAGCATTCC TCCAATTGTT TTCCTCACCG ATACATGACT TCCCTATCGC GGTCACAGTT
1501 CTCCACCTTG TGAAGCTAGT TGGTCAGATC AACCCTATCA TAGTGTCACA CGACAAGAAG
1561 TTGAAGCGGC TTCACAAAAA CTCGTACATC CATACCGCAA ATCTTGCCTT TAGACAGTTC
1621 ATGCAAGAAA GCTTAGAGTC TGTAACCGTG ACTACGTTCA CCGCGTTCTC GCATGAAAAC
1681 TTGATGCACG AAGACATATG TACACTTGCA CTTGATCGAA CAACATCGAT GATTGTCGTC
1741 CCATCGGGGA GGAAATGGAC CGTAGATGGG ATGTTCGAGT CTGACGACCT TGCTGCAAGA
1801 CAACTAAACC AGTCATTACT CGATCGTGCG CCTTGTTCGA TAGGCATACT AGTAGATCGT
1861 GGACAATTCT CGCGGAAAAG CTATGTAACG AGCAAGAATA GGTACAACAT TGATGTTGGT
1921 GTGCTCTTCA TTGGAGGCAA AGACGATAGG GAGGCACTAT CATTGGTGAA GAGGATGAAA
1981 TATAACCCGC GGGTCCGTGT AACCGTGATC CGACTCATCT TCGACCATGA AATAGAGTCA
2041 GAGTGGGACT ATATTCTTGA TAACGAGGGC CTGAAGGATT TAAAGAGTAC TGAATCCAAT
2101 GAAGATATTC TTTATACAGA GAGGATTGTG ACTAGTGTCG TTGAGGTAGT CAAAGCTGTC
2161 CAATTGCTTG CAGAAGAGTA CGATCTAATG GTGGTCGGGA GAGATCATGA TATGACATCA
2221 CAAGACTTAT CAGGACTAAC GGAATGGGTC GAACTACCAG AGTTAGGTGT CATCGGGGAT
2281 TTGCTGGCGG CTAGAGATCT AAACTCTAAG GTCTCGGTTT TAGTAGTTCA ACAACAACAA
2341 CAACAAACGT GA
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Revised Predicted Protein Sequence (783 aa):
1 MNTTTYIGHC RISFFNISSQ GFWENLKSPD VVFGYSLPLL EIQIILIFFC IVMSHMFLRC
61 IGVSQIVSYM IAGLILGPQL FDILEKSSGK LSADPALDGT AALRCISVFG RLMFTFLMTV
121 RTSRRVAFHS GKLPVVIGIV SFFAPLFSLS FLNLFTDNID PHYMSLDKAL AERTVIVITQ
181 SQILLPSTTY ILLELKIINS ELGRLALSAS AINDMLGIFA MIVATTQATY IHVSHAIAYR
241 DLVAVIIFFL IVFFVFKPMV QWIIDRTPED KPVEDIYIHA VILTAFASAA YFVFFNMKYV
301 LGPLIIGIII PEGPPLGSAL EAKFERLTMN VFLPISITFS AMRCDGLRIL SQFTDIYFNI
361 FLTLLILVIK LVACLTLCLY YKLPRSESLA VSLILSYKSF VEFVLYEAVL EEKFISQATY
421 AFLILYSLLS AGIVPMVVRS MYDPKRKYVN YQKRDILHLE ANSGLRILTC LHKPENVSET
481 IAFLQLFSSP IHDFPIAVTV LHLVKLVGQI NPIIVSHDKK LKRLHKNSYI HTANLAFRQF
541 MQESLESVTV TTFTAFSHEN LMHEDICTLA LDRTTSMIVV PSGRKWTVDG MFESDDLAAR
601 QLNQSLLDRA PCSIGILVDR GQFSRKSYVT SKNRYNIDVG VLFIGGKDDR EALSLVKRMK
661 YNPRVRVTVI RLIFDHEIES EWDYILDNEG LKDLKSTESN EDILYTERIV TSVVEVVKAV
721 QLLAEEYDLM VVGRDHDMTS QDLSGLTEWV ELPELGVIGD LLAARDLNSK VSVLVVQQQQ
781 QQT
›› Fasta: All CHX Protein Sequences
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Back to the Top · Last Revision: October 16, 2006 |
