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AtCHX19 / At3g17630 ›› ARAMEMNON · TAIR · PLANTS T · MIPS · TIGR
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Exon/Intron Map (revised by K. Bock):
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Sequences ›› partial cDNA [ Sze Lab ] · PAC MKP6 [ ATG-STOP: 50182 - 52754 ]
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Genomic DNA (3573 bp):
Revised coding sequence -- confirmed by cDNA from Sze Lab -- in blue.
Start: 500 bp before ATG; End: 500 bp after STOP
1 gtttacaaag cttcagaagg taagacatca aatgtgctgc ttagttaaga gacaggtaca
61 agtgcttgca aatttaggac agaaggacaa agacagagac gaaaacttcg gcgcagtgaa
121 ggcagttcat atctgcgaag tatagatgcg atatggttgg aagttaagta actgatagtc
181 tataaataga aaagtgcgag gtatatgccc accctggagt tggtatgtcc gcttctatct
241 catctaccta ttattagcaa actatagacg ttattagttt tctgtttttt ccttttatat
301 actcacttct ttaatgtaga ttctgtttaa taaaaacagt aacagaacag aataaaatct
361 tgatttcttt tttttcctcc cattcaggtc tcatacttcg tttggcaatg caatgaggga
421 gcagccaagg cagtattgaa gggtgaagca gtatctcgtt tcttgaccaa tcatcaacct
481 gtaagtagat ctccactagg ATGGCAAGCA CCAACGTTAC AGGGCAATGC CCGGGTCCAA
541 TGAAGGCTAC CTCCAATGGA GCCTTCCAAA ACGAAAGCCC TCTTGATTTC GCGCTTCCTC
601 TTATCATCCT ACAAATCGTC TTGGTGGTTG TGTTTACAAG GCTCTTAGCT TACTTTCTTA
661 AGCCTCTCAA ACAGCCCCGA GTCATTGCTG AGATCATTgt gagtttccta ctcaatctct
721 ttgtattttt ctttttctgt tttgatgaaa tcacatagca aaagagacta aaagggatgg
781 ttctgtagGG AGGGATACTG CTTGGACCTT CTGCACTAGG GAGAAGCAAG GCCTATCTTG
841 ACACCATCTT CCCAAAGAAG AGCTTGACCG TTTTAGACAC ACTCGCCAAC ATTGGTCTTC
901 TGTTTTTCTT GTTCCTAGTT GGGCTTGAGC TTGACTTTGC AGCAATAAAA AAAACTGGAA
961 AGAAATCACT ATTGATAGCC ATAGCTGGGA TCTCACTTCC TTTTATAGTG GGTGTAGGCA
1021 CATCTTTTGT TCTCAGTGCC ACCATAAGCA AAGGAGTCGA TCAGCTTCCT TTTATTGTCT
1081 TCATGGGTGT TGCCTTATCA ATCACTGCCT TCCCTGTGCT TGCTCGTATA CTAGCTGAGC
1141 TAAAGCTTCT AACAACTGAC ATTGGACGTA TGGCAATGTC TGCAGCGGGA GTAAACGATG
1201 TTGCAGCTTG GATACTCCTT GCGCTTGCTA TTGCTCTCTC AGGAGATGGG ACTTCTCCTC
1261 TTGTATCTGT TTGGGTTCTT CTCTGTGGAA CTGGATTCGT GATCTTTGCA GTTGTGGCAA
1321 TCAAACCTCT GCTTGCTTAT ATGGCTAGAC GCTGTCCTGA GGGAGAGCCT GTAAAGGAAC
1381 TCTATGTTTG TGTCACTCTA ACCGTGGTTT TAGCAGCAAG CTTTGTGACA GACACTATTG
1441 GGATACACGC GCTGTTCGGG GCGTTTGTGG TAGGTATAGT AGCTCCTAAA GAAGGACCAT
1501 TTTGCAGGAT TTTGACTGAG AAGATAGAGG ATCTTGTTTC GGGGCTTCTT CTACCTCTGT
1561 ATTTTGCGGC TAGCGGTCTC AAAACTGATG TAACAACGAT CAGGGGAGCA CAGTCATGGG
1621 GACTTCTAGT TCTTGTCATT CTCACCACTT GTTTCGGGAA GATTGTAGGA ACAGTTGGTT
1681 CCTCGATGCT CTGCAAGGTT CCTTTCAGAG AAGCCGTGAC ACTTGGATTC CTTATGAATA
1741 CCAAAGGTTT AGTAGAGCTC ATTGTTCTTA ACATTGGCAA GGACCGGAAG gtatagattc
1801 ttgaaagcca taataagact tataaaacat ttaaaagccg agttatctaa ataacgattt
1861 ttgtgagcag GTGCTGAATG ATCAAGCATT TGCGATCTTA GTCCTAATGG CATTGTTCAC
1921 AACCTTCATC ACAACTCCAA TTGTGATGCT TATTTACAAG CCTGCAAGAA AAGGAGCACC
1981 GTACAAGCAC AGAACCATCC AAAGAAAAGA TCATGATTCT GAGCTAAGGA TACTTGCTTG
2041 CTTCCACAGT ACCCGTAACA TCCCCACATT GATCAATCTG ATCGAATCAT CAAGAGGAAC
2101 AGGCAAAAAG GGACGCCTCT GCGTTTACGC GATGCATCTG ATGGAGCTTT CTGAACGGTC
2161 ATCAGCGATC GCGATGGTTC ACAAAGCTCG AAACAATGGT CTCCCAATCT GGAATAAGAT
2221 CGAGAGATCA ACGGACCAGA TGGTGATTGC CTTCGAGGCT TACCAGCATC TACGAGCAGT
2281 AGCGGTTAGA CCCATGACTG CAATCTCTGG CCTCAGCAGC ATCCACGAGG ACATATGCAC
2341 AAGCGCGCAT CAGAAACGAG TAGCGATGAT ACTGCTTCCG TTTCACAAGC ATCAGAGAAT
2401 GGACGGAGCG ATGGAGTCAA TAGGACATAG GTTCCATGAA GTGAACCAAC GGGTCTTGCA
2461 ACGAGCTCCT TGCTCAGTCG GGATTCTTGT GGACAGAGGA CTCGGAGGAA CCTCACAGGT
2521 TGTAGCCAGC GAAGTGGCTT ACAAAGTCGT GATTCCATTC TTTGGAGGCC TCGACGACCG
2581 AGAAGCTCTC GCATACGGGA TGAAAATGGT GGAACATCCA GGAATCACAC TAACTGTTTA
2641 CAAATTTGTA GCTGCGAGAG GAACATTGAA GAGATTCGAG AAGAGTGAAC ACGACGAAAA
2701 GGAGAAAAAA GAGAAAGAGA CTGACGAAGA GTTTGTGAGG GAGTTGATGA ATGATCCAAG
2761 AGGAAATGAG TCATTGGCTT ACGAGGAAAG AGTCGTTGAG AGCAAAGACG ATATCATCGC
2821 GACACTTAAA TCGATGAGTA AATGCAATCT CTTCGTCGTT GGAAGAAATG CAGCTGTTGC
2881 ATCGTTGGTT AAGAGTACAG ACTGTCCAGA GTTAGGACCA GTTGGACGCT TGTTGTCGTC
2941 ATCAGAGTTT TCCACCACCG CGTCGGTGCT CGTCGTTCAG GGATATGATC CAGCAGCAGA
3001 TACACGACCG CTCGTTGAGG AAGATGCAGA GTACGATCAG TCTTCCAGAG ATATTTCAGA
3061 CTTAACTGCC TGAacggatt ttattataaa aacaaaattt ctctgttttt ttttttgtct
3121 catgaaatat tttgatattc tttttggttg ggacttggag tgtctccatt gttctttttc
3181 tattttcctt aaattgatgg ttgacattag atttgtgggc atgaaaatcg acctgtaatt
3241 tcttaatatt ttgccttgaa tgatcaaagg aataatattt ttaagatcca acatttctag
3301 tcatcaccat ggaatgtatc cttgcccatg atggtgtcac ctacatacct ttttagggtg
3361 taatgtgttc attgttattc agaaaaaatg taacaaacgg aaaaatgtct aatcttaaat
3421 tacctcctga agagatatga atgcaaaaag ggaccacaac cgccaatgac accgacaaga
3481 gtcaaaagag acgtcactaa taaataaact aacacatttt cgaacaagaa tccataacgt
3541 taacattcac tcactgtcta tcacacacac aca
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Revised Coding Sequence (2403 bp):
1 ATGGCAAGCA CCAACGTTAC AGGGCAATGC CCGGGTCCAA TGAAGGCTAC CTCCAATGGA
61 GCCTTCCAAA ACGAAAGCCC TCTTGATTTC GCGCTTCCTC TTATCATCCT ACAAATCGTC
121 TTGGTGGTTG TGTTTACAAG GCTCTTAGCT TACTTTCTTA AGCCTCTCAA ACAGCCCCGA
181 GTCATTGCTG AGATCATTGG AGGGATACTG CTTGGACCTT CTGCACTAGG GAGAAGCAAG
241 GCCTATCTTG ACACCATCTT CCCAAAGAAG AGCTTGACCG TTTTAGACAC ACTCGCCAAC
301 ATTGGTCTTC TGTTTTTCTT GTTCCTAGTT GGGCTTGAGC TTGACTTTGC AGCAATAAAA
361 AAAACTGGAA AGAAATCACT ATTGATAGCC ATAGCTGGGA TCTCACTTCC TTTTATAGTG
421 GGTGTAGGCA CATCTTTTGT TCTCAGTGCC ACCATAAGCA AAGGAGTCGA TCAGCTTCCT
481 TTTATTGTCT TCATGGGTGT TGCCTTATCA ATCACTGCCT TCCCTGTGCT TGCTCGTATA
541 CTAGCTGAGC TAAAGCTTCT AACAACTGAC ATTGGACGTA TGGCAATGTC TGCAGCGGGA
601 GTAAACGATG TTGCAGCTTG GATACTCCTT GCGCTTGCTA TTGCTCTCTC AGGAGATGGG
661 ACTTCTCCTC TTGTATCTGT TTGGGTTCTT CTCTGTGGAA CTGGATTCGT GATCTTTGCA
721 GTTGTGGCAA TCAAACCTCT GCTTGCTTAT ATGGCTAGAC GCTGTCCTGA GGGAGAGCCT
781 GTAAAGGAAC TCTATGTTTG TGTCACTCTA ACCGTGGTTT TAGCAGCAAG CTTTGTGACA
841 GACACTATTG GGATACACGC GCTGTTCGGG GCGTTTGTGG TAGGTATAGT AGCTCCTAAA
901 GAAGGACCAT TTTGCAGGAT TTTGACTGAG AAGATAGAGG ATCTTGTTTC GGGGCTTCTT
961 CTACCTCTGT ATTTTGCGGC TAGCGGTCTC AAAACTGATG TAACAACGAT CAGGGGAGCA
1021 CAGTCATGGG GACTTCTAGT TCTTGTCATT CTCACCACTT GTTTCGGGAA GATTGTAGGA
1081 ACAGTTGGTT CCTCGATGCT CTGCAAGGTT CCTTTCAGAG AAGCCGTGAC ACTTGGATTC
1141 CTTATGAATA CCAAAGGTTT AGTAGAGCTC ATTGTTCTTA ACATTGGCAA GGACCGGAAG
1201 GTGCTGAATG ATCAAGCATT TGCGATCTTA GTCCTAATGG CATTGTTCAC AACCTTCATC
1261 ACAACTCCAA TTGTGATGCT TATTTACAAG CCTGCAAGAA AAGGAGCACC GTACAAGCAC
1321 AGAACCATCC AAAGAAAAGA TCATGATTCT GAGCTAAGGA TACTTGCTTG CTTCCACAGT
1381 ACCCGTAACA TCCCCACATT GATCAATCTG ATCGAATCAT CAAGAGGAAC AGGCAAAAAG
1441 GGACGCCTCT GCGTTTACGC GATGCATCTG ATGGAGCTTT CTGAACGGTC ATCAGCGATC
1501 GCGATGGTTC ACAAAGCTCG AAACAATGGT CTCCCAATCT GGAATAAGAT CGAGAGATCA
1561 ACGGACCAGA TGGTGATTGC CTTCGAGGCT TACCAGCATC TACGAGCAGT AGCGGTTAGA
1621 CCCATGACTG CAATCTCTGG CCTCAGCAGC ATCCACGAGG ACATATGCAC AAGCGCGCAT
1681 CAGAAACGAG TAGCGATGAT ACTGCTTCCG TTTCACAAGC ATCAGAGAAT GGACGGAGCG
1741 ATGGAGTCAA TAGGACATAG GTTCCATGAA GTGAACCAAC GGGTCTTGCA ACGAGCTCCT
1801 TGCTCAGTCG GGATTCTTGT GGACAGAGGA CTCGGAGGAA CCTCACAGGT TGTAGCCAGC
1861 GAAGTGGCTT ACAAAGTCGT GATTCCATTC TTTGGAGGCC TCGACGACCG AGAAGCTCTC
1921 GCATACGGGA TGAAAATGGT GGAACATCCA GGAATCACAC TAACTGTTTA CAAATTTGTA
1981 GCTGCGAGAG GAACATTGAA GAGATTCGAG AAGAGTGAAC ACGACGAAAA GGAGAAAAAA
2041 GAGAAAGAGA CTGACGAAGA GTTTGTGAGG GAGTTGATGA ATGATCCAAG AGGAAATGAG
2101 TCATTGGCTT ACGAGGAAAG AGTCGTTGAG AGCAAAGACG ATATCATCGC GACACTTAAA
2161 TCGATGAGTA AATGCAATCT CTTCGTCGTT GGAAGAAATG CAGCTGTTGC ATCGTTGGTT
2221 AAGAGTACAG ACTGTCCAGA GTTAGGACCA GTTGGACGCT TGTTGTCGTC ATCAGAGTTT
2281 TCCACCACCG CGTCGGTGCT CGTCGTTCAG GGATATGATC CAGCAGCAGA TACACGACCG
2341 CTCGTTGAGG AAGATGCAGA GTACGATCAG TCTTCCAGAG ATATTTCAGA CTTAACTGCC
2401 TGA
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Revised Protein Sequence (800 aa):
1 MASTNVTGQC PGPMKATSNG AFQNESPLDF ALPLIILQIV LVVVFTRLLA YFLKPLKQPR
61 VIAEIIGGIL LGPSALGRSK AYLDTIFPKK SLTVLDTLAN IGLLFFLFLV GLELDFAAIK
121 KTGKKSLLIA IAGISLPFIV GVGTSFVLSA TISKGVDQLP FIVFMGVALS ITAFPVLARI
181 LAELKLLTTD IGRMAMSAAG VNDVAAWILL ALAIALSGDG TSPLVSVWVL LCGTGFVIFA
241 VVAIKPLLAY MARRCPEGEP VKELYVCVTL TVVLAASFVT DTIGIHALFG AFVVGIVAPK
301 EGPFCRILTE KIEDLVSGLL LPLYFAASGL KTDVTTIRGA QSWGLLVLVI LTTCFGKIVG
361 TVGSSMLCKV PFREAVTLGF LMNTKGLVEL IVLNIGKDRK VLNDQAFAIL VLMALFTTFI
421 TTPIVMLIYK PARKGAPYKH RTIQRKDHDS ELRILACFHS TRNIPTLINL IESSRGTGKK
481 GRLCVYAMHL MELSERSSAI AMVHKARNNG LPIWNKIERS TDQMVIAFEA YQHLRAVAVR
541 PMTAISGLSS IHEDICTSAH QKRVAMILLP FHKHQRMDGA MESIGHRFHE VNQRVLQRAP
601 CSVGILVDRG LGGTSQVVAS EVAYKVVIPF FGGLDDREAL AYGMKMVEHP GITLTVYKFV
661 AARGTLKRFE KSEHDEKEKK EKETDEEFVR ELMNDPRGNE SLAYEERVVE SKDDIIATLK
721 SMSKCNLFVV GRNAAVASLV KSTDCPELGP VGRLLSSSEF STTASVLVVQ GYDPAADTRP
781 LVEEDAEYDQ SSRDISDLTA
›› Fasta: All CHX Protein Sequences
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