CBCB at UM
Chris Burge's lab
Chris Lee's lab
M. Zhang's lab
The Black lab
Genefinding on Yahoo!
Yi Xing's blog
Steve Mount's blog
email - Steve Mount
These pages, collectively accessible as www.RNAinfo.org, are a bit out of date right now (April, 2005) but under active revision.
A list of genefinders:
GENSCAN is a genefinder developed by Chris Burge.
limmerM is a gene finder developed specifically for small eukaryotes with a gene density of around 20%.
Genie - Genie
is a gene identification tool developed at the University of California,
Santa Cruz, that uses Hidden Markov Models to find genes.
FGENES - This genefinder is available through The Sanger
Center's Computational Genomics
GRAIL - The Gene Recognition and Assembly Internet Link is
available through the Oak Ridge National
Laboratory Computational Biosciences Section
HMMGene - This genefinder is available through the Center for Biological Sequence Analysis at the Department of Biotechnology, The Technical University of