Introduction to the Heterokontophyta
  - Introduction 
    
      - A large and diverse group which includes both phototrophs and heterotrophs
 
      - Flagellate stages are typically heterokont -- i.e., have two 
        dissimilar flagella
 
      - Plastids, when present, are secondary plastids without nucleomorphs
 
      - Pigmentation with chlorophylls a, c1 and c2, with fucoxanthin or vaucheriaxanthin 
        as accessory pigments
 
      - This gives the cells a golden color
 
      - Heterokonts, along with haptophytes and dinoflagellates, are therefore 
        referred to as "chromophytes"
 
      - Heterokonts are grouped together on the basis of their ultrastructure, 
        and this grouping has been supported by biochemical and molecular studies.
 
      - They are extremely diverse in terms of their gross structure, and classical 
        treatments didn't always put them together.
 
    
   
  - Structure & metabolism 
    
      - Flagellate cells of many with two different kinds of flagella
 
      - Forward-directed flagellum with mastigonemes
 
      - Pleuronematic (literally "with lateral threads") flagellum, 
        flimmer flagellum, tinsel flagellum; hence can be said to be "tinsellate"
 
      - Mastigonemes are three-parted tubular bristles with terminal 
        hairs. 
        
          - Composed of glycoprotein
 
          - Assembled in ER, transported to surface 
 
        
       
      - Reverse-directed flagellum is smooth, and typically shorter than the 
        forward flagellum
 
      - Base of flagellum often with a transitional helix 
        
          - (exceptions are Bacillariophyceae, Raphidophyceae, Phaeophyceae)
 
        
       
      - Eyespot is composed of a row of spherical, red or orange pigment 
        bodies 
        
          - Swelling at base of the rear (smooth) flagellum, lies near eyespot 
            in chloroplast
 
          - Thought to be involved with light perception
 
          - Phototaxis does occur, although some phototactic organisms do not 
            have obvious eyespots. 
            
              - Phototaxis may be negative or positive, depending upon the light 
                environment
 
            
           
          - Eyespot itself is a cluster of lipid spheres within the chloroplast, 
            densely packed with carotenoids 
 
          - The flagellar swelling is close to the eyespot, and presses into 
            an invagination in the cell membrane 
 
          - It has been proposed that the eyespot shades the flagellar swelling 
            and that the flagellar swelling is the actual site of photoreception 
          
 
          - If correct, this could also explain why organisms with no detectable 
            eyespot (including eyespot-lacking mutants) can be capable of phototaxis 
          
 
          - Precise mechanism for photoreception is unknown, but the action 
            spectrum has been determined (maximum at 420-490 nm), and a flavoprotein 
            with a similar absorbtion range has been found in some heterokonts 
          
 
          - The eyespot of Euglena (Euglenophyta) seems to be rather similar 
            to that of heterokonts. 
 
        
       
      - Chloroplast is secondary 
        
          - Chloroplast ER is present, as is a periplastidal network
 
          - No nucleomorph is present
 
          - Thylakoids are stacked in groups of three (lamellae), and a girdle 
            lamella is present in most
 
          - Pigmentation, Chlorophylls a, c1, and c2, fucoxanthin or vaucheriaxanthin
 
        
       
      - Reserve polysaccharide is chrysolaminarin (beta 1,3 glucan, with beta 
        1,6 branches)
        
          - Forms in vessicles outside of plastid
 
        
       
    
   
Classification 
  - Chrysophyceae - "golden algae" - are typically freshwater, 
    planktonic unicells 
    
      - Some classifications split addtional groups from the chrysophytes: 
 
      -  Synurophyceae 
 
      -  Pedinellophyceae
 
      -  Parmophyceae
 
      -  Sarcinochrysidophyceae
 
    
   
  - Xanthophyceae - often multicellular
 
  - Eustigmatophyceae - mostly soil algae, some marine picoplankton (0.2-2 micrometers 
    diameter)
 
  - Bacillariophyceae - diatoms - have silica frustules, unicellular 
    or weakly filamentous
 
  - Raphidophyceae - unicellular, with apical flagella (one points backwards 
    in a groove)
 
  - Dictyophyceae - silicoflagellates, two extant species, but important in 
    fossil record 
 
  - Phaeophyceae - brown algae, imporant marine macrophytes in colder 
    waters
 
  - Bicocoecida - not photosynthetic, unicellular flagellates 
    
      - Cafeteria
 
    
   
  - Oomycota - not photosynthetic 
    
      - "water molds" 
 
      - Phytophthora infestans -- causal agent of late blight of potatoes
 
    
   
  - Hyphochytridiomycetes - not photosynthetic 
 
  - Resemble chytrids, but with anterior, tinsellate flagellum 
    
      - Hyphochytrium
 
    
   
  - Labyrinthulomycetes - not photosynthetic 
    
      - The "slime nets" 
 
      - Labyrinthuloides
 
    
   
Supplementary Reading:
Tomas, C.R. (ed.) 1997. Identifying marine phytoplankton. Academic Press, 
  San Diego.
Williams, D.M. 1991. Phylogenetic relationships among the chromista: a review 
  and preliminary analysis. Cladistics 7:141-156. [a cladistic analysis 
  primarily of morphological data]
Medlin, L.K., A. Cooper, C. Hill, S. Wrieden, and U. Wellbrock. 1995. Phylogenetic 
  position of the Chromista plastids based on small subunit rRNA coding regions. 
  Curr. Genet. 28:560-565.
Reith, M. 1995. Molecular biology of rhodophyte and chromophyte plastids. Annu. 
  Rev. Plant Physiol. Plant Mol. Biol. 46:549-575.