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› OsCHX Genes/Proteins
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Cation/H+ Exchanger (CHX) Genes in Oryza sativa
Figures
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| Fig. 1. At & Os CHX Phylogenetic Tree (T-coffee) |
Tab. 1. OsCHX Genomic Information | Tab. 2. OsCHX cDNA & Protein Information
Note: CHX names were given to genes based on alignments and phylogenetic studies involving the AtCHX family (Reference included below the table). This was completed before the loci naming system was released. Thus, the OsCHX loci are currently unpublished.
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| Name |
Locus |
BAC/PAC Acc# |
BAC/PAC: ATG to STOP |
Exon # |
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| OsCHX01 |
Os02g58660 |
AP005290 |
56,676 - 59,266 |
2 |
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| OsCHX02 |
Os08g43690 |
AP005251 |
8,972 - 11,696 |
4 |
| |
| OsCHX03 |
Os09g37300 |
AP006548 |
[–] 116,417 - 113,865 |
2 |
| |
| OsCHX04 |
Os12g44300 |
AL732378 |
73,678 - 76,155 |
1 |
| |
| OsCHX05 |
Os05g39600 |
AC135924 |
38,925 - 41,773 |
3 |
| |
| OsCHX06 |
Os12g01820 |
BX000492 |
[–] 56,984 - 54,565 |
2 |
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| OsCHX07 |
Os11g01820 |
BX000497 |
141,611-144,016 |
1 |
| |
| OsCHX08 |
Os08g02450 |
AP004562 |
137,679 - 140,243 |
2 |
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| OsCHX09 |
Os12g02840 |
BX000506 |
12,549 - 15,153 |
2 |
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| OsCHX10 |
Os11g03070 |
AC136970 |
85,198-87,751 |
2 |
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| OsCHX11 |
Os05g31730 |
AC136222 |
[–] 128,439 - 124,482 |
3 |
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| OsCHX12 |
Os05g02240 |
AC093921 |
25,581 - 29,615 |
3 |
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| OsCHX13 |
Os03g61290 |
AC096687 |
[–] 27,131 - 22,453 |
2 |
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| OsCHX14 |
Os05g19500 |
AC130731 |
8,097-10,588 |
2 |
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| OsCHX15 |
Os12g42200 |
BX000457 |
96,921 - 102,797 |
2 |
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| OsCHX16 |
Os05g40650 |
AC118289 |
[–] 87,192 - 84,471 |
2 |
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| OsCHX17 |
Os01g60140 |
AP003255 |
40,971 - 43,842 |
4 |
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Reference:
Sze, H., et al. (2004). Expression patterns of a novel AtCHX gene family highlight potential roles in osmotic adjustment and K+ homeostasis in pollen development. Plant Physiol 136, 2532-2547. [PDF]
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